© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0110700.1
TCAACCAGTAACCCAATCACAGCCCATATACTTTGGGTTGGTGTGGACTTCTCGTTTGGATCTTCTAGGCCCAATGATACTAGAGTTATGGGTAGTGCTCTGTATTGATGCAGTAACAGTGACAGTGGAGCTCTGCTCGAGCCCGGATTGCGGTGTGAGCGGTTGCTCTGGGCTTACGGCAGGCGGCCATAATGTGACCTGTACTTGGTCGCTGGAGTGCGCTGCCTGAGGCTGATCAGCGCAGGTGTGCTCACCAAAGTATGTGACGTCGAAGAGCAAGCCGTCGTCGTGGCGCTGCACTTGCTTGGACGCCTGGCAGCCCTTGGTGGCACACCTGTAGTAACCCCTTAGGTAACTGAAGCCGAGGACGTTCTTCTGCCCGTACTTCCTCCAGCTGTAGCCGTCATCCGCCGGCACGGAGGTCACCCTCACTTGCCTTTTCCTCTTCGTTCTCTTTACCTTCTTGTCTCGCGTTCGCGTTAATCTGATCTGTTCGTCGACATTGGACTCCGCGGTCTGAGTGCAAGTGTGCTCACCGTGGTATACGATGTCGAACATGAGGGGGTCACCGTCGTCGCGCTGCACCTCCTTGGTCGCCATGCATCCCTTCTTCGTGTTCCAGTGTGTGCACCGGAAATAAGCTCTTGGGAACTTGGCGCCGAGGATCTCCTTCTGCTCGTACTTACTCCAGCTGAGGCCGTCATCCTCCGTATTACTCCTCACATGCCACATTTCCATAGGTAGCTTCTCCCTGCTTTCATCAGATTTATTTGCTCCATCCCCACGATCCTTTTCTAGAACTGCAGACTTCTCAGTAGAGCTTTCTTTCACGATATTTTGTTGTTTTTTCAGAATCCTGCATTCTCCCTCCCGTGTCCCGGCATTGCTAACATCCATACCATCAAAGGTCCAATCTACACATCGGATGTTGACGCTAGGACGTCCTGGATGCATCCTAATAGCGTTAGTCAAAGCTGACTCTGCAAATCTTCTACAATGATCATGAGCAGTAGAAGCGACCCTAATTTTGGCAGAGATCTCTTCAAGTCCAGACAGATGTTCGATGCCAACAGGAATAATATCATGCTGATCTGCTCTATGGACATCAAAACCTAACTTGAGCTTCCTTAGACTAGGCATTGCACCAACCTCAAATTTCATCCATGCTACACTGCATATAAACTTGAAGTATCTGAGGATTGAGAACCCTGCATTGTCAAAGACAATCCTTTCTGCAGGCTTTGTGTGGACATAAAGTGACAAAACAGTGAGCTCTGGTAATACTCCGAGAACATCAATATTATTACTTGTTACTTCCCTTATCCCAATCTTCAAAATGCAGAGGTTTCCAAGCTGCCCAATCCAATTTGGGAGGTTAGAAAAGATGCAAACACATGGTAACAACTCAAACCTCTGAAGAAGGGCTGGTGGAGAGGACACACTGCTCCAGCCATCAACATTGATCCTCGTCTTTGTATCCCTGTCAATATGTAGAGTATCTGGACAGGAAGAGCCAGGAGGCGATAAAGTTATAGATGTGAGATTACGGAGTTTCCCCAGAATGGATCCAAGATATTTCATATTATCCTTCAGATTGTCAGAATGTATTTCAGAATAGGTGAGCTGCAAATCCCGGAGATTGCTCAGCTCACCAAGGCTCCATAGATTCTCCGCTGAGTTACAGCTGAGATCAAAATATTCAATTGTACGAAGCGATGTCATGTGGACAATTCCACTGGGCAGGTTTGTCTTAGCAGGAAGAGTAAGATGCAGCAAACCTGGCAAATAAATGTCTGTTGGAACTTCACTTATTTTTCCATCTATTTTCAGTGTCTCCAAATATGGTAGACCTTGCAACCGGGTTGGCAGTTTTACGGTGGCATTAGAGGTGACCTTCAAATATCTCAGTCGGACAAGTTCTGAAATTTTAGTGAGATCAACAATGCCGGTGCTATCCTCATCACCCAAAAAATGTAGAAATAAAACTTTAATAAGTCGAAACTCCATAATGAAAGGCATATACTTCAAGACCCCAAAGAAGGCAATTGTCCGAACTTGGAACAATCTCATATTAGTAGGTGGAGGTGCATCTTCTACATTATTGAAGTGAATAGATAATCGTCGAACCTTGTCAGCAAATCTTATAGTTGCCTGTGAATGGTCTATTGCAATAATAAAATTCTCTTCTATTGACTTGTATGTAACAAAATTGAGTACAATATGGTGAACTACACAGGACAAAACCTCACCGCTGTCATCGATATGGACAGGCTGGATGATTTTTCTACCAACAAGCTCATCAAAATAGCCCCTTGAAATTTCTTCCTTGTCATGCTCTTCAGTTGCACAGATAAAACCTTCAGCTATCCATTGATTCACTAAATCATCCTTCCAAATTATGTGATCTCCTTGATACATACTAAGATACAACATGCATGCCTTCAAATGCTGAGGAAGATTGTTGTAACAAAGGTTCAGTAGTTGTTTCATCCCTTCCAAAGTAGGATTTGCCATCAAACTGTAACCTAAGGATTTGTTTATATAATCCCATTGTTCCAGTTTATCAAGCTGGCTTGCTAAAAGACTTGCAACAGTGACAATAGCTAGCGGCAAGCCACCACATTTCCTTACAATATCATATAATGTTTCACTGACTTCTGGAGGACACTTAGAATGAGAGCCAAAGACTATACTGAATAATAGTTTTCTTGAGTCATCCTCACCAAAAGGTATCATCTTGAAAATAAATTTCAAGTCATAACTACAAGATTGCAAAGCTAGATCTTCAATTTCTGTTGTGGTCAGTATTCTGCTAGACTTGTTACCCTCCGGCAAAGCGCACTTAATAATATCCCATGTGGATGTAGCCCATAGATCATCAATTACGATCAAGAACCTCTTATCTTGCAGATATGTCCTGATACTGGAAATCAGGCTATGCACCTTCCAATTGTCAGGTGATTGGTGCGACCGAATCTGTAAGAGGATATTGATGAGAAGCCTCCTCATATCAGTCTTCTGGGATGTCCGCACAAATGCCCGGCACTCGAACTGCCACCGAAGCTTGCGGTACAGCTTGTTGGCAAGCGTAGTCTTGCCAACTCCTCCAACTCCCACGATGGACACCACCTTGAGCTTCTCCTCTCCACACAAATCGAGCAAGTTTTCAAGCTTGTTCATGGCGGCGCCAATGCCAACATGACAGGTGGACTCCATGAATGCCTAGAGGAGGTAGAAGATACATCACCTCTAGTAGTAGTAGTAGTAGTGGTGGTGATGCCAGGGGGTATGTTTTCGAGCTTGTTCAGGATGGCTTCTATATCGGTGTGGATACCACGGACTTTGTCGGCATGCTCCCTGAACTGCACGAGAGAAGCAGTCGGGATGCCAGCAAGCAAGTTTTTGAGCTTGTTCAAGTCATTCAGGGCAGCTTCCATACCATCGACATCTATACTGACAGAACGGACGTTGTCGACATGCTCTCTGAACTGCGTCTTTGTGGGATGCCAAGGTGTGGCAGAGCATACATCTCCTCTAGTAGTAGAAGCAGTACCAGCGACACCACCGAGGTTGTTGTACATGGCATGGCGTTGAAGCGCATCCTGGATGCGCAGGCTGAATTCTCTGATCTTGTTGGCCATCCACAACCGTTGTTTCAGTTTCTGGGGAATACATGGGATCTTGTTTCCACGCCACCGATTGAACTTACGGTGGTGAATATTAGGTCTATTCTGAGACCTGGCGGCATGCTCGTACTGGTCAATACTGTCCTCGATGTCGTAAGAGAGCTCACGCACCTCCTTCATCCAGCACCTGACCACCATGCTATGGTCCTCCAGTTTTGGCTCACTGTGACCATGGAGGATTGAGATTATTTCCTCAAGATCTTGCTTGATGAGTGGTATCTCCTCGTCTGCGCCCTTGGGCAGCATGCTACCGTGATGACACAGCAGCTCCTCCAGCCTCCTGGGGAGGTTGAACATGGCGCCCTCCATAGATATCTTCTCTCAAGACAAATCGAGTGCATATATGTTACAGATTTGCAAGGTGTACTGCCGAACAAGAATCAAATAATACTATTGGAATCACTAGAAGCTGAAGGCATCATATCAGATTAGGATGAGCGAGCTTTCCGAGCGGTCGGAGTTGGGGGAGAGTTGTTCCATTTTGATTCATTTCCTAGCTTCCAAGTCCGAAATTTTCCCCTCTGGCGATGTGGCGTCTGGTCAAATTCATTGTCTCTACTCTCTAGGCCATTCAGCTAGTTCTCTTTAGAATAGTCGATGGGGCCATTAGTGTAGCAGTTGGACACTTAAATAATGATTACTATACGCAATTGACAAGCACTGGAGCACCATCCAGATCCAGCCATCCAGGATAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0110700.1 | 11 | 27792150 | T | C |
| Osa11LNT0110700.1 | 11 | 27788495 | A | G |
| Osa11LNT0110700.1 | 11 | 27789198 | T | C |
| Osa11LNT0110700.1 | 11 | 27789217 | A | T |
| Osa11LNT0110700.1 | 11 | 27789220 | A | G |
| Osa11LNT0110700.1 | 11 | 27789247 | T | C |
| Osa11LNT0110700.1 | 11 | 27789319 | A | G |
| Osa11LNT0110700.1 | 11 | 27789435 | A | T |
| Osa11LNT0110700.1 | 11 | 27789521 | T | C |
| Osa11LNT0110700.1 | 11 | 27789522 | A | G |
| Osa11LNT0110700.1 | 11 | 27789540 | G | A |
| Osa11LNT0110700.1 | 11 | 27789594 | C | T |
| Osa11LNT0110700.1 | 11 | 27789610 | C | G |
| Osa11LNT0110700.1 | 11 | 27789646 | T | C |
| Osa11LNT0110700.1 | 11 | 27789790 | C | T |
| Osa11LNT0110700.1 | 11 | 27790542 | C | G |
| Osa11LNT0110700.1 | 11 | 27790664 | G | A |
| Osa11LNT0110700.1 | 11 | 27790904 | G | A |
| Osa11LNT0110700.1 | 11 | 27790988 | T | C |
| Osa11LNT0110700.1 | 11 | 27791025 | T | G |
| Osa11LNT0110700.1 | 11 | 27791032 | T | A |
| Osa11LNT0110700.1 | 11 | 27791293 | C | G |
| Osa11LNT0110700.1 | 11 | 27791336 | C | G |
| Osa11LNT0110700.1 | 11 | 27791443 | A | G |
| Osa11LNT0110700.1 | 11 | 27791639 | A | T |
| Osa11LNT0110700.1 | 11 | 27791915 | T | C |
| Osa11LNT0110700.1 | 11 | 27791929 | G | A |
| Osa11LNT0110700.1 | 11 | 27792195 | A | G |
| Osa11LNT0110700.1 | 11 | 27792322 | C | A |
| Osa11LNT0110700.1 | 11 | 27792378 | C | T |
| Osa11LNT0110700.1 | 11 | 27792392 | A | G |
| Osa11LNT0110700.1 | 11 | 27792479 | T | C |
| Osa11LNT0110700.1 | 11 | 27792486 | A | G |
| Osa11LNT0110700.1 | 11 | 27792555 | T | A |
| Osa11LNT0110700.1 | 11 | 27792575 | T | C |
| Osa11LNT0110700.1 | 11 | 27792852 | A | T |
| Osa11LNT0110700.1 | 11 | 27792945 | C | T |
| Osa11LNT0110700.1 | 11 | 27792971 | A | G |
| Osa11LNT0110700.1 | 11 | 27791863 | T | C |
| Osa11LNT0110700.1 | 11 | 27793143 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0110700.1 | osa-miR5143b | Cleavage | 4.5 | 12.263 | 1 | 24 |
| Osa11LNT0110700.1 | osa-miR5830 | Cleavage | 5.0 | 21.594 | 1 | 24 |
| Osa11LNT0110700.1 | osa-miR6245 | Cleavage | 4.0 | 14.588 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR397a | Translation | 4.5 | 19.341 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR159a.2 | Cleavage | 5.0 | 16.232 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR159a.1 | Cleavage | 5.0 | 15.469 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR159b | Cleavage | 5.0 | 15.469 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR159f | Cleavage | 5.0 | 16.561 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR416 | Translation | 5.0 | 12.652 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR1320-5p | Translation | 4.0 | 18.022 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR2101-5p | Translation | 4.0 | 17.978 | 1 | 22 |
| Osa11LNT0110700.1 | osa-miR3981-3p | Cleavage | 4.5 | 19.832 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR5143a | Cleavage | 4.5 | 12.263 | 1 | 24 |
| Osa11LNT0110700.1 | osa-miR5147 | Cleavage | 5.0 | 14.917 | 1 | 21 |
| Osa11LNT0110700.1 | osa-miR5155 | Translation | 5.0 | 18.632 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0110700.1 | 11 | FON3 | Morphological trait | Panicle/flower | RM4601 | RM1233 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)