© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0009200.1
GGCAAGATTACAAGTTTATGAACGTGCATTATATGAAGAAAACCTATGCTTCCGAATCACGCTCAAAATTATAGAGTACAAAACCTGGCAAAGGGAAACATAATACCTTTCTTCATTGCTAGACTACTAGGTCCAACATGACAAGTCAGTACAAAATAATTTGAAAGGTCTAGCAGCAAGCGGTCTACAAAAGTTCATCTCGTTTTAGAAATGGGAACATATTGCATTTCGTGAATAAAAAAGGAACAAACTCAGCCTGAAGAATGACAAGCCACATATGTTGCTGGTCCAAATTGCTCAGGCTTAACCAGGGAAGCTAATATGTCCCACCGAATAATTGAACCCAAACAGGAGCCACATATTTGATATGAACTCCATTCCGTCTTGTATGTCAATGGAGGAAAGATTTGATGTCCTTACAAAACCTCCACATTCGAAGCCGCCGCTTGCACTGTTGCACATGCTCCTAAATGTCCAAGAGATGCCAGCCGAATAATGCATTTCCGATAGGAATATTATCTTCCAATAATTTGCGGGACTAGCAATTCCTGGGCACCTTTCCTGCACCCATAAGCCCACAAGTTGCTCCTCAGATATGCTTTTCTCTAGCCACTATACACTGTTATATGCATATAAAAAAATTTCCCAATAACTTGTGGATATGCCTATACTTCCCACCGTGAGATGCCTGATTCTTGCAGCCAAGCTAGTTGCTGCTCAACTCAGCTACCTTAATCAGGACCGAACTGTTCTTTCCTCGTGGTTGAGTAGCATTGTATATCTACGAAGATGAAGTAGTGGACTCAATCAGCTTTCCTCAGTAAGTGCCATCAGGTATTCAGGTTTGTGGACCATGTAGGCATCAACCTGTTACTACTTGTTATGCAGGTGCAAGCCTTTAACTGATGTGTCCGTAGATAATTGGCCCAGAGAAGATTTTATTATCTGTCATACATCCATCCATGTCAGGTTCACTGACAGCACTGCTCCGATGCTTACACCAATTCCAACATTCTTCCATACATGAGCAGGCCGCGTTGAATCTGATGCCATGCAGCAGGACATCACCTGCTTCAGAATCTTATGCCTACCCTTCAGGAATTCAGCCCCAGAAATGCACAAGTCTAACAGTCCTAACATGTGAGGGATGTTGTGATTTCTTGAAGGACGTCTAGTTAGTAAATAATAAGCAGTCAACACACCATCACCATAGTTCATATCTTCTGGGGATCAAACTTGTTAGCCTCCTTGACCCAAGTTTAACATTCTTGAGAGTACAATTTAACCATGGAAGGGGTTATTTCACCATGCAAAAGACCTGGTTCGCGCTCCACCACGATGGCGGCGGAAGGAGAGCAGGAGACCTCCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0009200.1 | 1 | 6655965 | G | A |
| Osa01LNT0009200.1 | 1 | 6656586 | C | T |
| Osa01LNT0009200.1 | 1 | 6657559 | G | A |
| Osa01LNT0009200.1 | 1 | 6658130 | C | T |
| Osa01LNT0009200.1 | 1 | 6658903 | C | T |
| Osa01LNT0009200.1 | 1 | 6659750 | A | T |
| Osa01LNT0009200.1 | 1 | 6661627 | G | A |
| Osa01LNT0009200.1 | 1 | 6662555 | T | C |
| Osa01LNT0009200.1 | 1 | 6661813 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0009200.1 | osa-miR818a | Cleavage | 4.5 | 18.079 | 1 | 22 |
| Osa01LNT0009200.1 | osa-miR818b | Cleavage | 4.5 | 18.079 | 1 | 22 |
| Osa01LNT0009200.1 | osa-miR818c | Cleavage | 4.5 | 18.079 | 1 | 22 |
| Osa01LNT0009200.1 | osa-miR818d | Cleavage | 4.5 | 18.079 | 1 | 22 |
| Osa01LNT0009200.1 | osa-miR818e | Cleavage | 4.5 | 18.079 | 1 | 22 |
| Osa01LNT0009200.1 | osa-miR1860-3p | Translation | 4.0 | 12.669 | 1 | 22 |
| Osa01LNT0009200.1 | osa-miR3982-3p | Cleavage | 5.0 | 23.108 | 1 | 21 |
| Osa01LNT0009200.1 | osa-miR5339 | Cleavage | 5.0 | 12.72 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0009200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0009200.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009200.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0009200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0009200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0009200.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0009200.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0009200.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0009200.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0009200.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0009200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)