© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0112000.1
CGGTTAAATGCTAGTATTTATTTCCTTTTTTTCTCACCTTTACAAACCTGCAAACTCATTTCTGCAAAGAAAAAAAAATGAAAATATGTTGCAGAGTATTCCTAATTTCCTACTACACCCTCCGTCCAAAAAAATAAATCTAGCACTAGATGTGACGTATTCTAGTACAATAAATCTAGACAGAGATATTCCAGATTCGTTATACTATAATATGTCATATCCAAATATGTTTAGTTTCGTTGTATTATGATGTGTACTATGTTGGTTTTTTATTTGACGGAGGGTGTATGATACCAGAAAGAAGAGAAAACACACTGAATTTCAGTTTCAGGCTTTCAAACGCATATGTACTCTGAAACTAACTGATTTTGGGGCCTCAACTGAATTTCAGGCGGTTTCGGAGGAGGCGATCTCAAGCTCCGCCCACCACAGGGGCTTCTCCCTCGGCGCCGCCTGCTCCGGCGACAACCCGGCGATGCCCCTCACCAGCCTCGCCACCTCGCCCATGCTTATCGCTCTCTTCCCCGCCTCCGGCCTCCTCACGCACTGCCGCACCACGTCGCACAGCGCCGCCACATCTTTCTCCGGCGCGGCAGACGACGACCTCACCAGCGTCCGGTCAGCCATGGCGCTGAGTGGCCTCTTGCCGTCCAGGTAGCTGGACGCCCACAGCACCAGGAGCCGGTCGTCCTCGGAGAATGGCCGCCGCCCGGAGATCACCTCCAGAACCAGTATCCCGAACTTGTACACCACGCTTTCTTGGTCGTCCTGCTTGTTGATGTCATCCTTCCAGAATTCGATGTCGGCGATCTTGGCTGCGTTGTCCTCGGTGAGATAGATGGATGATGAGCTCAAATTTGTTGGGAGAAGAGGAGGAGGATCTAGCTGGCTCATGTGCTCCAGGCAGTAGGCTACTCCCATTATGATTCGTAGCCGTGTTTTCCAGTCCAGATGTTCTGCTTCTCTGATATGCAAATGCTCAAAGAGGGAACCACATGGAGCATACTCGAACACCATCATCCTGGTGAATGGCTCCTCGCATGCGCAGTAACCAATCAGGTTCATGAAGTTCTTATGGTTCACTCTGGACAGCACCGAGATCTTGTTCCTGAATTGCTCCTCAGACTGAGCTGACCATTGTTGTGAAGAGTTAACTGAAGTGGACAGAACAGCTATTTCAACTCCACTTGACAGAGTTCCCTTATACAATGTGCATTCAGGTAAAGTGCCGATCACATTGATGAAACCCTCGCATGCCGCCTCCAGTTCTGTCCTCTCAAGAGAAGGCACACCTGTTACAAATGCCTTCTTTAGCTGTCCACTCAGCCCAGGTGTGATGCTGATGATTGAACTGGAGATGATTGGCTTTTGGGGTGTGTTTGTGTTTGATTAGAAGCCAGCTCCCTGGCTTGCAGAAGTCGCCTTGGTGTGGCATTGTGAACAGTTTTTGCTAAACATTTTCTGCATGGTTCAAATCCTGCACTGTCATGAGGTACAGACTCTGAAATTGAGCTATGCTCTTTCGATTCAGATGGTGTTTCACTGGCAAACATGTTCTCTTTGAGTAATAAGTTGAACACTCTGCCAATGAGCTTCCCTTCTCCCCAATTTGACAAAGAGCCAATTGATTGGTCTTGCTCACTCTCTCTATAACCCGGAAGAGCTCTCCCTTCTTCACTGTGGGGAGCACAGGACCCAAATCTTGCAGTGACAAGAAAGGAGAACACTATGAAGTAGGCCACTCTAATGGCCCATGGCTCCATTTCTGTCCCGATCTAAATTTTTGGAAGAGCTCGAACCTCTTGTTTCTATGGAGTGTGGAGATGGGGCTAGACAGCTAGTTTGTCCAGAAAGCTCAAATCTTTAGGATTGTGAAAGCACACATGATTGATGATTCCATACCACCTCAAGACAGGTATTACCATGTAAAGAAGCATCGTCTTCCCTCAAAGATTGAAATCTTGATCTGTAAAGAGAGGAATCCAATTCCAATCCACTCTATAGTAGTAGGAGTAGTAACTTCCAGTTTGGCATTTCTCCTGGCTCTCTTCTCTTGGCCGGTATGCAGTTGGAAAAAAGATAAGAGACAAGCACACAAAGTCTTGAGCTGTAAAGCTTTCCACACCACGAGTCTTGAGTTAACAAAAAGGAAGACGCGGCATATCCTTGTCTACTTTTGTGTATCGATTGGAGCCGAATGTCTGCCCTTCTGCAGTAGTAGCCCTGCCTGCCAAGTACTCCAGTATTAGTATTATACTACTAGTGTGCAGGTTAGATATGGCAACGGCAGATTTTGTTTTAAAGCCAGCTTATGGTGTGCAGAAAATGAACTTCTGTTGGGCACATAACCATTTGTTACTAGTTCTGCTTTATTTAAAGTTCATTTTATGTCGATCGGGATAGTTTAATTATCAGGCAGTTCGCAGCTTATCTACTCGCATGGCAATGGCAACTTGGTTGGTGTCCTCCTATCTTGGCTATGTATATGGCTTGCTGCTTCCTACTAACCAGCTAGCCATTATATATCGATAAGAGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0112000.1 | 12 | 306791 | A | G |
| Osa12LNT0112000.1 | 12 | 306806 | A | G |
| Osa12LNT0112000.1 | 12 | 306669 | T | A |
| Osa12LNT0112000.1 | 12 | 306841 | C | T |
| Osa12LNT0112000.1 | 12 | 306900 | C | G |
| Osa12LNT0112000.1 | 12 | 309061 | C | T |
| Osa12LNT0112000.1 | 12 | 309607 | G | A |
| Osa12LNT0112000.1 | 12 | 309983 | G | A |
| Osa12LNT0112000.1 | 12 | 306688 | G | A |
| Osa12LNT0112000.1 | 12 | 306917 | A | G |
| Osa12LNT0112000.1 | 12 | 307796 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0112000.1 | osa-miR5788 | Cleavage | 2.5 | 19.828 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR5824 | Cleavage | 5.0 | 17.986 | 1 | 24 |
| Osa12LNT0112000.1 | osa-miR156b-3p | Cleavage | 5.0 | 19.339 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR160a-3p | Cleavage | 4.0 | 17.983 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR160b-3p | Cleavage | 4.0 | 17.983 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR160d-3p | Cleavage | 2.5 | 17.983 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR164a | Cleavage | 4.0 | 19.346 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR164b | Cleavage | 4.0 | 19.346 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR166b-5p | Cleavage | 5.0 | 22.238 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR166d-5p | Cleavage | 4.5 | 22.238 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR395f | Translation | 4.5 | 17.206 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR159a.2 | Translation | 5.0 | 16.867 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR160e-3p | Translation | 3.5 | 17.983 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR164d | Cleavage | 4.0 | 19.346 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR164f | Cleavage | 4.0 | 19.346 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR816 | Translation | 3.5 | 17.995 | 1 | 20 |
| Osa12LNT0112000.1 | osa-miR1857-3p | Translation | 5.0 | 23.2 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR1846a-5p | Cleavage | 2.5 | 10.956 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR1846b-5p | Cleavage | 2.5 | 10.956 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR1846c-5p | Cleavage | 2.5 | 10.956 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR2869 | Translation | 4.0 | 20.555 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR2878-3p | Translation | 4.5 | 18.107 | 1 | 24 |
| Osa12LNT0112000.1 | osa-miR2918 | Translation | 5.0 | 16.587 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR3981-3p | Cleavage | 3.0 | 22.572 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR5161 | Translation | 4.0 | 20.919 | 1 | 20 |
| Osa12LNT0112000.1 | osa-miR5518 | Translation | 5.0 | 17.448 | 1 | 21 |
| Osa12LNT0112000.1 | osa-miR443 | Cleavage | 4.0 | 17.968 | 1 | 22 |
| Osa12LNT0112000.1 | osa-miR814a | Cleavage | 2.0 | 16.569 | 1 | 22 |
| Osa12LNT0112000.1 | osa-miR814b | Cleavage | 2.0 | 16.569 | 1 | 22 |
| Osa12LNT0112000.1 | osa-miR814c | Cleavage | 2.0 | 16.569 | 1 | 22 |
| Osa12LNT0112000.1 | osa-miR5490 | Translation | 5.0 | 14.745 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0112000.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0112000.1 | 12 | Ste2 | Physiological trait | Sterility | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)