© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0112300.1
CAGAAACCTCGATTTCATTTTTTTTCCCCTTCTTTTCAAAGTAATACTCACTAAAGCAGCAGGCAATACATTTCATTCATATCATCAGGCATACAAATGCCTAGCTAACAATGACAAATATGAACTAACTATTCTCAGCCCACATACATCTTCCTATTCCAGCTGCCTCTTTTTAAACTGGAAAAGCCAGCCATTCAGGTTTCACACCTCTGCAGGTGAACACACTACTGACACTGGAAGGCTATTGCATTTTGATTCAACAACCACGGCTTATTCTTCGCTCATATTAGTTGTGGGAGGATCTGAACCCATTGCTGTAATATTTCCAAAATCCTTTGTCTCTGGAGAATTACATATTGCAGAGTTCTTTGGTGTCTCCTTCATGTTCGTAGCTTCCCCATTAGTTTCCGTTCTCGGTGTCTACTCCTTTACGACCCTAGCGTGCACGTCAGGTTGTGGCACTACAATGTCACCAGCTGGCTCCTGCTTTACAGCCCTATCTTGCTCATTAAGTTGGGAAATTACAGTATCTCTGGCTGGCCCAAGTTCTACACTTCCAGCTTCCTTACAAGCTTGCAGCATTGCAGTATCGATGAATGGCTCCTGCTTTACACTTGAAGCTTCCTCTTTAGGTTGCAGAATTGCAGCATCGATGGATGGTTCCTGCTTACCACTTATAGCTTCCTCATTAGGTTGCACCACTGAAATATCTCTGGATGGCTCCTGTTCTACTCTAGCTTCATCATCAGGTTGCACCAATGCAGCGTCACTGTGTTGGTTCTCCTTATCAGGCTGTACCATTTCAATATCTCTAGGTGGCTCAGCTTCTACTCTTTTAGCTTCCTCACAAGGTTGCAGGAACAGAGTGCCACAAGATGCCTCCTGTGTTATTACTGTTGGCTGCATTAGGACATCAGAATCGTGAGCATCTCCAGCCACTCTAGCTTCATCCTTTTCCACATCAACAGCTTGACCATCCTTCTTCATGAATTTCCTCTTGTTCCATTTCTTCTTGAAACCACCTTTCTTTACTTTAAGTGGTTTCGGTGTTTCAATTGGCCTTTTCTCTACCTCCTTACCTACCCTTTTACCAGGAACTACAATATATTTTGTTGCACCATTTGCCGAACCCTCTGATTGACCTTGGATTGCCAGAAGAGCAGTTCGGGCAGCTTTTATCTCTGCATCTTTCTTTGTCCTGGCTGCAGCACCAATATATTGTATTCCACCAATCTCTACAGTGCATATGAAAGGAGCTAAGCCTGAGGCTGATTTGGTGCAAATATAAGATGGAATGGCATAATTCATCTTCTGTGCATACTCCTGAAGAAGATTCTTGCACAGCCCAGTCTCTTGCTGAAAACATATTAATATGTGTAAAAAAATGCACAGTGATCCAGGAAAGAGATTATAACACTATGCTAATTTTAGTCAGCCTGATTCCTAAGAACTAAAGAACATCCAAATTATCTAAAGCCTGGCAGTACGAGTCTAATTTCCTATTGTATTCATGGGAATAACTTAGTAGAGTTGTGAGCTTGAGAAAATACAAATAAATCATGACAGAAGACAACAATAAAGACTTTCTGCAATCTCCTACCTGGCCCATCTATACAAATACCCTCCCTTCTTGCTCACTGGGTCCTACCTTTAGCCGACAATCTAGTGATCTACAAAGCCGAAAGCTCCGAGTATTCCTGGAGTTATAGTCCATGGTTTGCCTTTTCTGTCTCTGTTTTTATAATTCTTATACCGTTCTTCAGATTTTTGAAAATTCAAAACCAACAACTGTAGTGAAAGTTTGAAACAAAAAGACCATTACAATGCTTTCTAATAATCATCTACTACAGTAGCAGGTCCCAATAGCCCTTGCTTGCACAATGCTCCAATCAGCTGCCCCAACACCGGTGCATCGTGCACAAATAGTGGCTCCAACAGTAACTCCTGTGCCTGTGTGGCACCGCCACCTGCCTGCAGCAAGCCTATCAGCTCCGACAATGCCGGTGGATCCCACTGCAGGCCACGCCTTGTTGCCTCCTGCACCAACTCCCTCACTGTGCCCATGTCCCCGGCAGACATGCACCCGGCGACTACCACACCAAATGTCCTTACATCCGGTGGGCACCCGGCATGCTCCATGCAGGTCATCATCTGTCGCGCTCTGGCAAGGTCACCTTTCCTGCATAGCGCGCCAATGTACACGTTGTACACATCCACGTCTGGCACCAGCCCTCTCAGGAGCATTTCATCAAACACCTCCTCCACAGAATCAAACTCCAAGCACTTGCTGAAAGCTTGCATTGTCAATTTGAAGTATGCAAGTGCAGGTGCCACCCTGTTAGAGCCCATCTTATTCTTCATGACCTCATATGCCTCCACTACCTTTCCCTCCTGCAGAAGCGCTTCGAAGACGGCGTGGTAGTCAGATCTGCTTGGGGAAATGCCCCAATGGCACATCTTGTCCAAGAATGCTACTGCATCCTGAGCGGAAGCGTACTGGCACAGGGAGGAAAGGACAGCACGACAACTGGCCGGGTCAGGGTCAAGGAGAAGCGAGGGCATGCAGCAAAGGAGGTCGGCGGCAGCAGCGGGGCGGTGGGCCTGGCAGAGTGTGGAGGTGAGGATGTGGAAGGTGGTGGCATCAGGGGAGACTGATGGGGCAGCGAGCAGGAGGACTTTAGGGGCAAAGCGGAGGAACGCTGGGGAAGAGCAGATAGCAGCGAGGAGGGAGTTGAGGGCACGAGCAGTGCGGAGGGTGGAGGAGAAGAGGGTGGCAGCGGCAGCAAGACGGCGGTGGCGTGCAAGGGTTGCCAGAAGGTGGTGGTGGTGGTCAGCTTCTCGGTGCATTTCCCTCAGGTTCAGTTGCTGACTTCCTGTGTTGCACAGGCCAGTCTCTTGAACAGCTGGGATATTTGCGTTGGCTGGTATGGACTTGACAATTTCCATGAGGGCAACTTCAGCAGCAGACTGTTCTGCAGCCTTTCTGTTGAAGAATCCGGGCAGGGAGTCATAGCTGGTATTATTAATCACCACTGTGGACTTGAAGACAGGCTCGTGGGAAGGTCCCTCCTTGAAGGTATGATACTCTGGAGTCTGGAGGCCGGTTTTCTGTGCATACTCTTGCAGCCGGCTCTTGAAGACGTAGCAGTTCTCAACCCGGATTCCGGCGGTGGCGCCGTTGGGAGCGGGCGAGGTGTTGGCGGTCTCCGGCGGAAGGGGCGTGGGCGGCATGTCCATTCCCACCTCGCCGCCGCCGCCGCCGCGTCGTCGTCGAGAGTCGAGAGAGAGAGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0112300.1 | 12 | 539029 | A | G |
| Osa12LNT0112300.1 | 12 | 536853 | T | G |
| Osa12LNT0112300.1 | 12 | 537649 | A | G |
| Osa12LNT0112300.1 | 12 | 538153 | T | C |
| Osa12LNT0112300.1 | 12 | 538483 | A | G |
| Osa12LNT0112300.1 | 12 | 539258 | T | G |
| Osa12LNT0112300.1 | 12 | 539613 | G | A |
| Osa12LNT0112300.1 | 12 | 539931 | T | G |
| Osa12LNT0112300.1 | 12 | 538895 | A | C |
| Osa12LNT0112300.1 | 12 | 539254 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0112300.1 | osa-miR818f | Translation | 4.5 | 20.959 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR5079b | Cleavage | 4.5 | 15.984 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR167a-5p | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167b | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167c-5p | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR398a | Cleavage | 5.0 | 12.06 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167d-5p | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167e-5p | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167f | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167g | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167h-5p | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167i-5p | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR171i-5p | Translation | 5.0 | 19.682 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR171i-5p | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR167j | Translation | 5.0 | 14.57 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR415 | Cleavage | 5.0 | 13.621 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR444b.1 | Cleavage | 4.5 | 14.346 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR444c.1 | Cleavage | 4.5 | 14.346 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR1442 | Cleavage | 4.0 | 18.862 | 1 | 20 |
| Osa12LNT0112300.1 | osa-miR1847.1 | Cleavage | 5.0 | 15.842 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR1428b | Translation | 4.5 | 17.322 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR1428c | Translation | 4.5 | 17.322 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR1428d | Translation | 4.5 | 17.322 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR1860-5p | Translation | 2.0 | 24.248 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR1870-5p | Translation | 4.5 | 21.722 | 1 | 24 |
| Osa12LNT0112300.1 | osa-miR1320-5p | Cleavage | 5.0 | 11.995 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR2096-3p | Cleavage | 4.5 | 21.166 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR2097-5p | Cleavage | 4.5 | 10.218 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR2097-5p | Translation | 4.5 | 6.313 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR2097-5p | Translation | 5.0 | 14.936 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR2863a | Cleavage | 5.0 | 21.916 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR5076 | Translation | 4.5 | 11.157 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR5076 | Translation | 5.0 | 11.644 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR5079a | Cleavage | 4.5 | 15.984 | 1 | 22 |
| Osa12LNT0112300.1 | osa-miR5492 | Cleavage | 5.0 | 22.742 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR5492 | Translation | 4.5 | 3.835 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR5496 | Cleavage | 5.0 | 19.621 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR5511 | Cleavage | 3.0 | 24.192 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR3982-3p | Translation | 5.0 | 24.94 | 1 | 21 |
| Osa12LNT0112300.1 | osa-miR2094-5p | Cleavage | 5.0 | 21.149 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0112300.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)