© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0113600.1
CAATTTTCCGAGTTGTATTCTTCGACCAAAAGATGTGCCTGGCACTCGTAAAACACTTGAGTTTGTCGAACGATCAAATTCATGGTCTTATAAGCATAGCAATTCTTGGTTGATTTTCTCGAGCAAATCAATCAAGTCCCTGGTAAAAGAAGCTTACTGCAGAATGTTCGGTAAACAAGGACCAAATGAACAGTGCATCTTTAAATGATAAGTTCGTATATCAACTCCCTGGCTTCTCTTCACAAGTACAAACTCCAGGCTAGTGTTAATATCAAAATAACAAAACAGATGTATTCCCAGGAAGAGCCCAGTTCTTTGTCGAGTACATTCTGTTCATCTCATGCAGATTTTCTTATGTTGATCATCAGGCTAATTCAAATGCCCTGACCCTTATCCATCTTTCCTTGCATGTCAAGATTCAAAACTTGAGAGTGATCATCTCCAAAGCTGGTTCATGAACACATATGCTCTGCTCCACGACTCCACCAGCAGGGGGTTCTTGCCATGCTCGTTTATTTGTTGTTAGTGCCCAGCATGCTCCCTAATCTCGTATCTCCACAACAGGAATATGGGAGATGATGTGCCAGTCCTTCCCGACCCTATTTTTGTAATGCCTACTCAAGGTAGGGTTGTAACTAATCACCAAATGCTGAAGAGAAGTAAGGTGTTGTATGGAGCTGGGCAAGGATCGAAGGCCAGTGCAGCTTTGCATATAAAGCGATCGGAGCGCGGAGAGTTGTCTGAGTGACTCTGGCAGCACGGTGAGCATAGGGCAGCTCATCAAGTTGATGTGCCGGAGTGAGGTGAGCCCCTGCATGGACTCCAGAAGGGTCGTAAGGACAGGCAAGATATTGATCATAAGGTCCTCTAGAGAACCTAACATCCCCAGTCCTTCTGGCAGCTTGTGGAGGGCAAGACAGTCCTGTATACTTAGGTCTTCAAGGTTGGTAAGATGCTGAATTCCCTCAGGCAACTGGCTCAGATTTCTGCAACTAGAAATATCCAATTCCTTGAGGGAGGTGAGATGATTTACCACCTCAGGCAACTCCTTTAGATTGTCGCATTCAACAATAGCCAACTTCTCCAGGGATGTAAGGAGCATGATCGACTTGGGGAGGCTAGCCAATAGTGGGATTTCTTTCAGAACTAGAGTTTGCAGAGAGCGGAATCCCCCCAGCCACTCTGGCAGCATGGCAAGAACTGGGCAACCCGAGATACAAAGATACTGGAGGGAGGTGAGGCTCCGGATGATCTCCCCTAATTGCCTTAGGTCACTGGAATAAATTGACAAGGATTCGAGCCCGGTGAGGTTCTGCAGCACTTCCCAACCTGACGATGATCCAGCCATTCCTCCTAGTTCTAATTTCTTGAGGTGAGGGGAATCCACACTAAAGCAGATGGATGAGGATTCCTTGTCAAGAGGATGGAGCGGATGAGAGAAGCTAACTTGAGACAGCAGCTGCTCGTTGCTTCGTTCCAGTGTCAAGCTATCCAAATATGGTGGGAAACATGGGCATTACTTCAGCTTAGGACAATCACTCATGACTAGAGTGGATAGGAAAGGGAAGCAGTGCTCAACTTGTTCGTGATCAATACAACAGGGCTTTCCTTCCTCCCCACTTACTAATGCAGGTGAGCTTGTCCACAACTCCACCAAATTAGGCATTCCTTTCAATACAAAAGTATTCAATGAAGGCAACCGTGCAAGTCCTTGCAGATTCTCCAAGTTTGGAAATTGTTCCAATACAAGTTTAGTCAGTTGAGTGAAATGAGGTGGATCAATTTGCTCTAACAAGCTATCTGAACAAGAGGATTCTCTTTGCTTCATCATCCAACGTGAGAAATGCTTACCTTTGTAATTATAGATATTCAGCTTCTTAATTTGTGATGGTGGTTCAAGACCATTGAGCACACGCAGCTCCTTTTCCATATCTAATAATGGCTCTTCTTCCAGACTATCCGAGCACCCTTCTGCACCATTTGAAGACCAATCCAATGTCAAATTGAGTATACCACTCTTTTCCTTCAGGGAGGCCTTTTCTGCATCATCTGGATCCTCTACATATTTAATAATTTTTATTTCCAGATCATTGTCGGTTAACAAGTTGAGGTTTCGAAGCCCTGATATTCTTGCATGCTCGCTACTGCCACCTATAACAAACAAATGCAGCCTTTGAAGATGAGTTAGCTGTCCAATCCCTACTGGCAGGCCACCCAAATTCGAGCATCCTTTTAGGTTCAAAACTTCAAGCCTCTCTAGGTTCCCTATGCCCTCCGATAACTCTAGCAGCCCCCAGCAGTTTTGAAGGTCTATGTATTCCAGGGTGCTCACCAATGTGAGGCATTGCGGTAGTCTGGTAATTTCGGTTCCACTAAGTGTCAAAGTGCGTAGTTTATGACAAGCAAATGAACTGAACAAGTTGTGGATACCCTCAATCTGTGCTAAGTTGATGGACTGTAAGTTGCAAAGCGTCCCAAAGAATTCTGACCATTGTTGCCTCAAAGAGCGACAATGCATAATGTTAAGCACTCTTAGTTTTTTAATTTTACATATGGAGTTTGGTATCTCCCTGATACCACTGCCACGCAGGAGAAAGCTTTGAAGATTATGACAGTCACCAATGGACTGAGGCAAACTTTCAAGATCCAAAAGACATGACAACTCTAGGGTTCTCAGCTTCTTAAGCTTACCAATAGACTCAGGTAATGTGGTAAGTGCCCTGCAATATGTAACATGAAGGGCCTGCAAGTTCCAGCAATGTGAGATTTCTTCTGGAAAGGCTCGACAGCTAGCGTGTGAGATACGAAAATAGCTAAGATATTCGAACTTTGGTATCAATGGAAGCAACAAATTAGTAGCGCCCATACTCTCCAAAATAATAGAACGAACATGGCACCTTTTCTTGATTGGCTTGTTGAGTGCGAAGTTGTCACCAGAAATATAGATAGCATGGACCTTGCTAAATAACTTCACTTCAATATTCTCATTGCACGAAGCCAAAGATAAATATCTGCATTTTTGGGAATTACCAATAGTTGCATTCTGAGAATGAGACACCATTTCACCCTGTAAAATTTGCCGAGTAAGGTCAAGAACCAGGTCATGCATCTTGCATATTTCCATTTCATCATACTCATCTACCTCTAGATCTTGGAGAAAGTGCACTTTCAGAAGAGAATCAAAGCAGTCATTTGCAACATCCTCTACTTGTTCAATCTCATTCATTGGATTGATGAAGCCATTTGCTATCCACTCTCCGATCAACTGGTGTTTGTAGATCTTGTAGCCTTTAGGAAATATAGAGCAATATACAAAACATTGCTTCAGATGATCAGGCAGATGAAAATAGCTCAGCCTTAATGACGCAAACACTCTATCTTCTATATCATCAACATTCCACATGTTACTATCACGTAAGGCACACCATGCATCTACTGTTTTCTTGTTACGGAGGACACCTGCAAGAATTTTAATTGCCAGTGGCACCCCACCACATTTTTTAATAATCTCTCTTCCAATTTCTACAAATTCAGAGGGCAGACCTTTTGCAGCTAACCTTAAACTTTGTTGAAATAAATTCCAGCTGTCCTCATCTGACAAGAAAGCCAACTTATATGTACATGTAGATTCCACTGCCTCCGCAACTCCCTGATCACGAGTTGTGAGCAAAATCCGGCTTCCAGGTGATCCACTCTTAAGATATAGCATGAATCGTTCCCAGTCATATTGATTCTTGTGCCAAGCATCATCCAAGACAAGTAGAAACTTATTCCCATTCAACTCGTTTGAAATTGCTTCAACCATCTGTTGGTCGGTACGAAGATATGATGTTTTCTTTAAAATGGCTTCATACAGCTTGCCGACGAGTTTGTTATTATCAAATTCTTGTGACACGTGAACCCAAAATATTGAGCCTTCAAAATGCTCTTTTATTTTGTTGTCATGACAGATGTGTGTGGCCATAGTAGTTTTACCGGTTCCACCAAGTCCAACAATTGAAACTATTGAGATTTTCTGTTGGTCATCTATTAACTTACATATGATCTTGTGCTTCTCCTCATCTCACATGTATTTTTGAGTCATCAACATTGCCCAATAAGGATGGCTCACTGATAATCTTGTTTTTATGAACATTATGATCGATTGGTATAGCATTCAATATAGTATTGACATCGCCTCTTTGCTCGACAATTGCAGCAAATCTGTTTTTGATTGTCTTTATCTTGTTGGCCATTTTGAGTTGAAACATGGCTAGTTTTGGTTTTGTGCGCATGTATTTGAGCACAGCATACTTGTCACGATCATTATCTGTGTCATGTTTCTCAGACTGAAGATGAAATTCATGTACCAAATCTTCAAGATCGTAAGCAAAATCTTTCAATTTTTTTAGCCAATTAGATGGTGGTTTATTACCAATTGCATTATCACCTGCTACCTGTAGCCCGCTTTTGATCTCCTCAACTAAATCTTGAAGCTCCTGGAGATCTTTCGTAACACCCATAAGAGAACTATACTCTCTTATTACAAGTGGTGCTAACTTGTCTCCCACAATCTTAAATAATCCATACAGCAGCTTCCATGCCCATATGTTTGAAACTTGGAAGCTTCTCTTTGGCCCAAATCCTGATATGGAAAAATAGGTGTTAAGCCTTTGCCTTCTCTTCGTTGAAGTTGTGCTTCTTCGATCTCTTTGAAGATGCACTTGTTTTGTTCAATTGTTCATAACATCATGATGAACCAAGAGGTACATGTATGTGATATATTGAGGACAGGTTTTAGTAGTACTGTAGTAGAGTACTAGCTCCCTGAGAAGAGGCAGAACAATCCCCTGAGAAAAGCTGATCTCAGGTCGTCTGACTTGATCCTGCAGTATCCCCTCACTGTCCCAAGCAACACAAATAACACCTGTTTCTTGGGATTTAGTTGCAGAGTGGTGGTGGTTCTGGCAGCTCCATTCATTAGAGCTCCCTTGTCACCTTAAAATGTGATTAGTATCCACCAATTTGGGTTGGTGTAGTGCTGGGTGAGTTGGAAACACATGCCCACAACATATAATATAAATCGAATATCCACCAATTGCAGTTTAAATACAGAAAGCTGGTGTGGAAATGTCACTTTCGAAACCACTCTATGGCAAGCCAGTCAAAGAAGGACGATCCTCACAAAAATCATAGTAATAATCTAGTTTTGCTTAGCTGTTGGTAGTCAGATGGGGGCTGTATGAGGACAGCGATTTCTAGTTTGGGGCTGTAGTTGCAAGTTGCAGATCGAAGTATCGAACAAGTTGAGCTCCCCCCTAATAGATCTAGTCTGGGCGGGCCAGGGAGAGAGAGAGAGAAAGGTAGGCGTGGGGGATCAGGGATGCGATACCTAACCTCGTCGTGGAGATGGAAGACGACGACCGCGCGGCTGCATCGTTGGGCCATGCGTCCGCGGCAGTATGCGGATGGGATAGGAGCCGGAGGCGAAGGGAGGGGAGCAAGCCGTGAGTCCTGGCGGCGGCAACCGGCAGCAACGGTCGCGCAAGCGGTGGCCGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0113600.1 | 12 | 1160401 | T | A |
| Osa12LNT0113600.1 | 12 | 1160745 | C | G |
| Osa12LNT0113600.1 | 12 | 1161683 | C | T |
| Osa12LNT0113600.1 | 12 | 1162809 | T | C |
| Osa12LNT0113600.1 | 12 | 1163722 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0113600.1 | osa-miR5534b | Cleavage | 4.5 | 12.017 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR5542 | Cleavage | 5.0 | 19.065 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR5802 | Cleavage | 5.0 | 24.702 | 1 | 24 |
| Osa12LNT0113600.1 | osa-miR5143b | Cleavage | 4.5 | 8.458 | 1 | 24 |
| Osa12LNT0113600.1 | osa-miR1319b | Cleavage | 5.0 | 18.926 | 1 | 24 |
| Osa12LNT0113600.1 | osa-miR5079b | Cleavage | 4.5 | 11.888 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR166d-5p | Cleavage | 5.0 | 15.1 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR398a | Cleavage | 4.5 | 22.009 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR167e-3p | Cleavage | 4.5 | 19.155 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR167i-3p | Cleavage | 4.5 | 19.155 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR426 | Cleavage | 3.5 | 15.827 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444a-3p.2 | Translation | 3.5 | 21.575 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444a-3p.2 | Cleavage | 3.5 | 23.191 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444b.2 | Cleavage | 3.0 | 23.191 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444b.2 | Translation | 4.5 | 21.575 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444b.1 | Cleavage | 3.5 | 22.297 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444c.2 | Translation | 4.5 | 21.575 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444c.1 | Cleavage | 3.5 | 22.297 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444d.2 | Translation | 3.5 | 21.575 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444d.2 | Cleavage | 3.5 | 23.191 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444e | Translation | 3.5 | 21.575 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444e | Cleavage | 3.5 | 23.191 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444f | Translation | 4.0 | 21.575 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR444f | Cleavage | 4.0 | 23.191 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR1847.1 | Cleavage | 3.5 | 20.836 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR1853-3p | Cleavage | 4.5 | 8.511 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR1860-3p | Cleavage | 4.5 | 21.92 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR827 | Cleavage | 3.0 | 14.142 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR2101-5p | Translation | 4.5 | 19.541 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR2275a | Cleavage | 5.0 | 19.886 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR2275b | Cleavage | 5.0 | 19.886 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR2868 | Cleavage | 4.0 | 13.2 | 1 | 20 |
| Osa12LNT0113600.1 | osa-miR2929 | Cleavage | 4.5 | 14.327 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR3979-5p | Cleavage | 5.0 | 17.89 | 1 | 20 |
| Osa12LNT0113600.1 | osa-miR5079a | Cleavage | 4.5 | 11.888 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR5081 | Translation | 5.0 | 11.09 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR5143a | Cleavage | 4.5 | 8.458 | 1 | 24 |
| Osa12LNT0113600.1 | osa-miR5485 | Cleavage | 5.0 | 18.086 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR5485 | Cleavage | 5.0 | 21.544 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR5491 | Translation | 3.5 | 12.668 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR2275c | Translation | 4.0 | 21.138 | 1 | 23 |
| Osa12LNT0113600.1 | osa-miR2275d | Cleavage | 4.0 | 19.886 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR2275d | Cleavage | 5.0 | 17.713 | 1 | 22 |
| Osa12LNT0113600.1 | osa-miR444c.2 | Cleavage | 3.0 | 23.191 | 1 | 21 |
| Osa12LNT0113600.1 | osa-miR1853-3p | Cleavage | 4.0 | 22.41 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0113600.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0113600.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)