© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0115400.1
TGAAACGAAATAAGTACGTGCAACTCTTGTGATGAAGGGAGTACAAAGGATGATTACATATTTGTAGCACAAGAAGGGCATGGAAGACCATAGGCTATATGGCCCATCACAGTGCACGCTCGGACGTCCATCACTGGTCGGATGGCCCTCGGGCAGTCGGGCTCAAAAGGCAGAGCACTTAAACACTACTCAGAAACATTAGTAATAATTTATGAAACCAAGCACTATAATACATGCAACACTAACTAGACAATAATCATTGTGATAAAGTTAGAAACTAGGTCTCTCGACGTTAAACAGGTTCACAAGATAGTGATATGGGGATCAATTCAACACAGGATGGCCTCTTGTCTTCTTATTTTAGCTGCAAGTTTACGTTGGACCAGATCCTCAGGAAGAGTCCAATACGGCATAGGAACCGGCCATCTATCAGGGTGAACACTATCATCTCCAGCAATCTTCCAATCAAGCACATCAGATGGATTACCATGGCTATGTTCAGCAACAGCCCCTTTTGTCTTAAAATACTTCAGGATCTCGCGAATCTCACACCATGATAGGAATGCGGTGCCTTCTACACCCTCATCGTAGAAGTTCATGCCAACAAAGGTTCCATCGAAACAAAGAAGAGGCCCTCCAATGCCAGCCTTAGTGGTTGTACATCCAGAGTAACTAAGAAATTTGCAGTCATGTGTGACAACAGTGGGAAATTGTTGCCCTCTTGCAGCCATTAATCTGCCAGATTCGAAGATACGCCCTACAGCTAGTAATTTCCGACAGTTATGCCCATAAGGTTGAATTTTCACTGGTTGGCGAACACAGTGATCCTTCACACTGACTAGAGCAACATTGTAATGTAAATTATAATGTTGTACTGTCCCTACGGTGCGCAGATTATTTGGAAGCAACACTTCAATCCTCAAGTTTTCAGCAATCCTGTTTTCATCACTAGAATCCCTAAGTAAGTTCGCTGAAGTCAGAATAGTGGCACACTCGTTCCATTCAATAAAGAAACCCGTGCATGCAAAAGTTCGTTTATCTCCGTTGAATGAAGCAAGTGCGACAGTATTTTCGCATATGCTAGAGGCAACATCTTCACTTAGTTCACTCCAGACACCTTTACCAAATATGTCACCAAAAGGCTCTTCAAAAGTATAAGCCAAAATCATGCCATCTTTCGATTTTGGGGGCTCAGGATAGCCCAAGGATTCTAGATCCCCGTATCGATCCTTGTTAAGAACATCTCTATGTACTTGATGAGAGCTAGGCATCTCACCGCTGGGACTTTCTCCAACCCAGACTTCCTTCAAAGCCTCTAACCGCGCAGCAAATCTGACCTCATGATCGAGTATACAATTCACAAGCTGGTCAAGAACTCTATCCCCTGGCACAAATACGGTTCCCTCGGTAGTGAAGGAAAGGTTCATGCCAAGAAAGTCCCCATCAAAATCAAAAAGTGGCCCACCTTCATAAACCTCAGAGAATTTACAAGTGGACGACATAAGATATCCATTGTATGATTCACCAATCAATACCCCACTTGTGGTCATTAATTTGCCAGAGATATCACGGCCTAGAGCTACTACCTTGCTATGCGGTACAAATTTCTGAACATTGTTGAAAGGCACAGGACGAAGATCAGGTAAGTTCTCCACAATGACAGCAGCCATGTTGTGATCTAAATTATATTCTCTCAAAAACCCTATGACAACAGTGTCTTCATGGTGCACTTCAACCTTCAAGTTATCATGATCTTTTCTTGCGTCATTAAAAGCTTTAAGCAAGCTTGCTGAGGTCAGCAATTTTATAACATGTCCATTACGGTGTACAGCTATGCCCGAGCATACAAATAACATTGTGTTTCCATCGTGCAGGGCAAGTGAAACAACACTTTTGGACAGATTAGATGCAACTTCTCCACTGAGCTCACTCCAGAAGACACCTTGATTCGATTCGCAGGGCAAGTCACCTGAAACCAAGGACTCAGCTATCTCTCCTTCATTGCAAACTATGTCCTCCTTTATTCTATGCTTCTTTGAATACGTCATGACAAAATCAGTTTTTTCATCCCTCTTCAAGTTACTTCTGAGATCATAACGACCGCTCCGCATCTTCTCAGCACGGAGGGCGGAGGCGGAAGCAGCACGACGACGGCACCGCTGCTCGCCTGATGGAGATCGGCGGAGGCGGCGACGAACTCGCAGGAGATGGGAGTCGAGGCCGAGGGAACGGGTAGATCGACTTGGGCGCAAAGATTCAGAGGCGAGAGTATGCGGTGGACGCCGTCGGCGCCGCCGCTCCCGATGATGGAGATCGGCGCGGGAACCCGCGGGTGAAGGGGACGGAGAGGTCGACCTGCCCCGGCTCAGCGGACAAAATGGTTCTTATGTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0115400.1 | 12 | 2019312 | A | G |
| Osa12LNT0115400.1 | 12 | 2022228 | T | C |
| Osa12LNT0115400.1 | 12 | 2022229 | C | T |
| Osa12LNT0115400.1 | 12 | 2022258 | T | C |
| Osa12LNT0115400.1 | 12 | 2019584 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0115400.1 | osa-miR5789 | Cleavage | 4.5 | 14.65 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR5823 | Translation | 4.5 | 15.593 | 1 | 24 |
| Osa12LNT0115400.1 | osa-miR5825 | Cleavage | 4.5 | 12.558 | 1 | 24 |
| Osa12LNT0115400.1 | osa-miR5837.2 | Cleavage | 4.5 | 19.567 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR166k-5p | Translation | 5.0 | 10.377 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR166l-5p | Cleavage | 5.0 | 10.233 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR169f.2 | Cleavage | 4.5 | 16.947 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR413 | Cleavage | 3.5 | 20.924 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR1429-3p | Cleavage | 5.0 | 13.673 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR444f | Cleavage | 4.0 | 14.961 | 1 | 21 |
| Osa12LNT0115400.1 | osa-miR1850.3 | Cleavage | 4.5 | 19.482 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0115400.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0115400.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0115400.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0115400.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0115400.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0115400.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)