© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0000300.1
AAATCAGTAAACGCATGTAACAGAGCAGCTATTAGAAATTATTAGTGTATGTATTACAAGTCTGTCTAATTTACCAAAGGGATAGATCGATCGATTACAATAGCTGTGTTTGACAACGTTAGATTCAATCAAAAACATGGGTGGGTCAAAAAACAGAGGGGCCTATACCAACAGCAACAAATGATTTGATGATGAGTTAATAGAATAATATCCATCCTCCTACGACCGAGAGAGAGAGAGAGCAGTAAGTAAACAATTAATATTGGTAAACCTGGACCTTACTGAACAAACAACATTAATTCTGCTAATACATATGTACAACAAACACTTCTTTCAGCACATCGGAGCTGACTGCGGTGCTCACTCATGCTTTGCTTTGATTTGCTTTCCTCTCCTCCTGTATTTACCCTGTTATATAGTATTCTGTAACATCGTCCTCTTCCCAGCAGCAAGCACTTGTTATTCCAAGGGGGTCAATCGATCAATCTCCCACAGCTTCTTCTCTCAATATCGAAGCAAAACAGTCGCGATCTCGGCAGCAGCATCTCCTGATTTAGTTACAACAAGGACAGTATTTTGCCGATGACCCCTAAGGCTTGGATAGAAATCTATGGAAGCGCTGCACTTTCGCAGCATATGTTTTTGAAGCCTGCAGCTTCTCAGGCACATTTCCAACAGGTGAAAATCTCCTCCTCTTTCTCAATCGAAATAAGAAATCTTCAGTGTCAAGGACATATGAGACCTTAGAGGTCTTGCATGATATCTTGCATTCAAGGCCATTAGCGACTTTGACACCATCCATGGCCTTCAACGAATCTGAAGGCTCGTCGTTATTTGAATGCTTCCGCTTATTCCTTTCCAGGAAGACACCCTCAGACAATTTTCTGTCTGACATACTCGACAAATACTCGTTAAAAAGATACGAGGAAAAATTGGGATCAATTGATACTGCAGTCACTTCAGGCTTTTCATGGCCATATTCCATCAGCTGAATAGACAATTTTGTAGGATTTGAGCAACATTCAAACCGGTATATGCTCTCTTCATGGAGGAGCACGCGTGCATTTTCATGATAGACTAGATCAAAGAACCTCCCAGGGGATCTTGATTTTTCATATAAATAAAGCTGGAGAAGCTTGTTGTCCATTTCATCTGTTGCTATAGCTTGAAGCTGCTTCACAACTTTATATATCAGTTTATCCAAAGTAAACAGAACATAGGACTGAGTACCAATGATAGAACGGCAGTCATCCTCAAACTTGGTATTATCCGAAGAACCATCGAGCAAGTTGTAAAGTGCACTTATAAACTTTGCATATAGGTCAGGTGGGTTTGTATCCTTGGAAGTTCTCCATTTCTTTTCAGCACTGGATGAGTTTGTCTTAGCCGAAAGTAATCTTTCGTACAAGATCTGATGCAGCCTGAACAGTACATAAAATGAATCATTCCCATAAAATATACGCGAGGACTTTTCATCTCGGTCATGTAAAGCTGTGGGTACATGCTTGGCAAGTGGTTTTACGGAGTGTAGAAAGCGTTCCGATAGCGGGAGTGATATTCCCCCTTCCACATCATGTGTCTCAGTTGTTCCTTCTGCCTCACCCTCACTTTCAGCCTTGGCATCCTGATCATCATGATCCATATCTTCCTCTTCCTCATCATGATCTTCACGAGAGCACTCCTCACCATCACCAGATTCACTTCCTGATGCATCTTCACCACCCTCGGAGGCATTCTCACTGTCCTCGGTAGACCTTTGTGCGCTTTCCTCACCCTCATCATCAGCATCAGCATCATTCTCACCAGCTGCTTCAGCACAAGATGGTTGTGCTTCTCCAGACCTACCCTGGAATGGTCTGCTTGTGGAACCTTCCTTCGCTTTAGATACTCCATCTACAGCTCCATCTTCAAAAGGCGCAAAATTGTCCTCTTCAAAATCCCCATTAGGAGATAATTCACCCTCTTCTCTTTCAACTTTTGGGGTATTGTGGGATGCAGAAGCTTCATTGAATAGGCGCCCTTTGTTACCCTCACTTGCACCTCCACCATTTAAAGTTGATCCTGACCTCCCTGTTTCTCCACCCTCTACTGATGGTAATGTTTCATTTCCAGCCCGGGCTTCAGCAGCAGTGTCATTTCCAGCATGAGAACTTCTAGAAGCATTCACACCTGATGTTGGTTCCAAATTTGCTTTAGCATTGCCATGCTGTTCAGTCCTAGCAACAGGAATGTTCTCTGCAGACCTCTCGGTAGGCATGTTTTGGGTACTAACAGCGGGAATTTCATTAGTTCCAGGGGAAGCACCTTGCACTCTTCCATTTACGGCAGTATTCGATGGTTCCTCAGCCCTACGAGCAGTTCGATCAACATCATGGAAACCATTTTGAGTATCTGTTGCTACTCCATTCACCATTCTAGCCAGAGATGACGGTGTTTGCTCCTGTGGAATATTTTCATCATGGCCATGCTTGGCAACAGCCCCTGCTGCAGTAGTGTTGATTTCCCCAACAGTTGCAAGACCAGACTTTGTGGTTCGACTCTTGGGTTTGACTGCATCTGCATCCTCAGCACCATGTGTCCGAGGCTGAACACCCAAAATTGGCTCCAGAAAAGTTGTCCAAATTCTCACAACTTTGTCCAGTTGGTCTGAGGAACTGCAGACTTCACCACAGGAGTACTTAATGATCTTATACATATCTTCATGGATGTTTGAATCTACATAGTCAAATGACATATTGGGAACTATTGGACGCCTATTTCCAGCAGCAATAGCAAGGAGCACATCATCTTCCTTTCTTTTCTTCTCATTAATTTCTTTGATCTCAGTTAATAGAGATTTTGTGCTCAGGTTCTTTGTATCTTGCTGTTTGAAATAGAAACTGCGGTGGTCAAGAGACTTGTGATAATTTTTGGCATATATCTCTGCCCAAACCTTGTTGAAATCTGATCGGCACCTTGACCATTCTTCCTGCTTCTGTTTAAGCCTAGTTAAGATGACTGGTAGAGCAACACTAGCGTTCTTTCGAAGGACATCCATCACATCCAGACCATGGTCACCATATAACCGTTCAATGCACCTCAGATTCAAAGGAGTTAAATGCTCATCGATGCGTATTGGGCTATCTGGTTTTAGGGAGTTGTCTTGCATCTTTTCTATCAACTCTTCGACACGCTTAGTTGCTGCATTAACTGATTCCAACAGCATGTCCAACTCAAATCTGTCATCTTCACATCTAAATAAACTCTCTTCGTACTGATTCTTTCTCATGTGCTTAAATGAATAGTCTTCACTTCCTGATGTCACTGATACCCAGTGATCGTTAAGCACTGAAGCTCCAAGCTCAGTCTTGTTGCCTGCGGGAGGCATTGGGTAATGTTTAGGTAGAAGCCGGTAACTTGGAGTGCACCGCTGACAATTTGAAAGATCGAGCTCTGATACAGGTTTGTATATATACTTTTCTTTGCTAGAGAACACAGGTTTTTGGCTAGGAGCTTCCTTATATGCTGGTACTTTCTCGATTCTGTCCGGTTCTTTTTCTGTTCCCTTTCCTCCCTCTTTCCTTTCCTCAGTTTTAACAATTCGTCCAGTTTGCCTTTTACTGAAGACACCAGCCAGAAAACCATCTATATTCTCACAGTGCTCCAAGAATTCATTAAACCCATCCATAAGATCTGGATGCTGCTGAAGTATATCATTCACCAAGTTCTTCAATTCACTCCTAGTAATAATTTCCTGGCTGTATATGTGAAGACATTTCAAAAACTCCTGGTAAGCATCATGCTCCAGCTTCTCCTTCACTTTTTCGCAGAAATGGAACTCCTGCGTGTATACACTCTTAAGTGCATCTTTATTATCATATAATGAAGCAGATGCACCAAGTATTCCGTGATTTTCCAGGGGCCCTCCATGGTGTGCATCAGCACTGGTAGGGTCCTCCATCTTCCTTGGAAAAGGTTTGCGCTTAAGTCCTATATCAAGATCTTTGCTGTCAAGTTCACCATCCTTATCGCCTCTATCATAATCATGCCTATCCTTAGGGCGTCTTCGCTGGATAACATGGTCCAGATCAGGACGATCAACACTCTCACGGTCAGCATGTGGATGAGCCTTATCCCTCTTTTCATTCCTACTAGCAGGAGGCACCAGAGAGGTCCTGTCATCCCGCCTAATACCAGGCCTTGAAGGGGCCACAGCTTGTGGAGGCACGGAGGTATCAGGCAAGAAGTGTTGGAACTCTTCGAGTAAATCTTTGTGGTCTGCAAACAACACAGCAACCTCATGGTAAACATCTTGGATGGATTTATTGTCCTTGCGGTACATGTTGAGGATGTCTAAGAATGCCTTATAGACATGCTCATCATGCTGGAACCGATTCTTAATCTTGTTTACGAAATTGATGGCTTCCACGAAATCAACAGGCTTCTTCTCCTCCTGCAGCTTGATTGCATAACCCTTGGGCAAGAAGGTATTGAAGCCAAGGATGAGCTCAGGGTACCCGTTGAAGAGTGTCTTGACACGAATAATGACTCCGTTGGTATCAATCCTCTCACTCTTGAAATCGCGCATGACCTCGAGGAACTCCTCGTATTTCTCCCTCTTGTCCTGGAACTTATCCTTGACGGCCTTGAGGTAGACGAGCGCATCGTTCGTGGTGAGCTTCTGGCCGGCCGTTGCGCCGCCGGCGGGCGGCTGAGCAGGCGGAGCAGCGGCGGCCTGAGGCGGCGGCGCTGCAGCGGAGGCAGGCCCCAGAGGCATGTGCTGCGGCTGCGCCGTCGGATCGGATCGACCGACGTTGGGGCGCTTGAGTTGGGAGCCCATGAGCGCGTCGTCCCTGGCGCGCTTCATCCCCCCATACACAGACTCCCTTCCTCCTCCTCCCCCTCCTCCCTTCACCCAACCAAACCACCGCCGCCTCCTACAGAACAACCTCCCGGTCGCCGCCGCCGCCGCCGCCGCCGATCCTCTCAAACCTCGGAAGACGTACACCGGCGCCGGATCTGCCCGCCGCTGGCTCCTGCGAGACCCCCCGAGCGCGGCGCGAAGAGGGCGCAGCGCGAGGCGAAGGCGACGCGCGGGGAGGAGAGGCGGCTAATCGCCTCGGCGAGACGCGAGACGCGAGAGGGAAGGATGGGTGAGGAACGAGGCAAGGGCGAGGCGAAGAAGAAGAAGAGAAGCGAGGCCTCCTCTTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0000300.1 | 1 | 514302 | C | T |
| Osa01LNT0000300.1 | 1 | 514225 | G | A |
| Osa01LNT0000300.1 | 1 | 514232 | T | C |
| Osa01LNT0000300.1 | 1 | 514565 | A | T |
| Osa01LNT0000300.1 | 1 | 514893 | A | G |
| Osa01LNT0000300.1 | 1 | 515378 | T | C |
| Osa01LNT0000300.1 | 1 | 515585 | A | G |
| Osa01LNT0000300.1 | 1 | 517063 | A | C |
| Osa01LNT0000300.1 | 1 | 517133 | T | C |
| Osa01LNT0000300.1 | 1 | 517260 | G | A |
| Osa01LNT0000300.1 | 1 | 518407 | G | A |
| Osa01LNT0000300.1 | 1 | 518826 | G | A |
| Osa01LNT0000300.1 | 1 | 519274 | A | T |
| Osa01LNT0000300.1 | 1 | 521290 | A | T |
| Osa01LNT0000300.1 | 1 | 521447 | A | G |
| Osa01LNT0000300.1 | 1 | 521930 | A | G |
| Osa01LNT0000300.1 | 1 | 522046 | T | A |
| Osa01LNT0000300.1 | 1 | 520893 | G | A |
| Osa01LNT0000300.1 | 1 | 518434 | G | A |
| Osa01LNT0000300.1 | 1 | 519277 | T | G |
| Osa01LNT0000300.1 | 1 | 516438 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0000300.1 | osa-miR5791 | Translation | 5.0 | 7.225 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR5837.1 | Translation | 5.0 | 16.567 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR396a-3p | Cleavage | 4.0 | 18.457 | 1 | 20 |
| Osa01LNT0000300.1 | osa-miR396b-3p | Cleavage | 4.0 | 18.457 | 1 | 20 |
| Osa01LNT0000300.1 | osa-miR162b | Translation | 4.5 | 22.514 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR1861g | Translation | 5.0 | 17.694 | 1 | 22 |
| Osa01LNT0000300.1 | osa-miR2097-3p | Cleavage | 4.5 | 11.79 | 1 | 22 |
| Osa01LNT0000300.1 | osa-miR2105 | Translation | 5.0 | 9.657 | 1 | 20 |
| Osa01LNT0000300.1 | osa-miR2105 | Translation | 5.0 | 21.148 | 1 | 20 |
| Osa01LNT0000300.1 | osa-miR5150-3p | Cleavage | 3.0 | 21.334 | 1 | 24 |
| Osa01LNT0000300.1 | osa-miR5152-5p | Cleavage | 3.5 | 15.009 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR5157a-3p | Cleavage | 4.0 | 21.334 | 1 | 24 |
| Osa01LNT0000300.1 | osa-miR5157b-3p | Cleavage | 4.0 | 21.334 | 1 | 24 |
| Osa01LNT0000300.1 | osa-miR5339 | Cleavage | 4.0 | 18.075 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR5488 | Translation | 5.0 | 19.834 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR5488 | Translation | 5.0 | 23.272 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR5489 | Translation | 5.0 | 14.474 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR5499 | Cleavage | 4.0 | 15.013 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR166i-5p | Translation | 3.5 | 23.196 | 1 | 21 |
| Osa01LNT0000300.1 | osa-miR2096-3p | Translation | 4.5 | 17.761 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0000300.1 | 1 | n+p1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Osa01LNT0000300.1 | 1 | n+s1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Osa01LNT0000300.1 | 1 | Gc | Others | Others | nan | nan |
| Osa01LNT0000300.1 | 1 | yd1a | Morphological trait | Seed | R753 | C161 |
| Osa01LNT0000300.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0000300.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)