© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0116100.1
AAGGATTATTCATTATTCATTTCACAAAATCATTGTTGGCTTTTACCAATAGGAACCCTATATACTATTTTCGAAATCTCGGTCCCAAATGTTCACTACCATTCAACTTTTTTTTTTTGAGATAGTAGGTATATGGGAGACATAGTCAAGAGATTTCTATTACACCTCATCAAAAGAGAAGAACAGTGGAGAACATCTGTATCTCCATGAAGCATGAACATGTGAATAAGGAAAAAAATTGACAAAATTTATCCAACATAGAAGGAAATGTTTGTATCAACTATCTATCTGGAAAGCACCCAACTTCTTTTCTCAGAGAATGTTCCCCAAGCTCCATCTTCCTTGCTAGGGATTTCCACCAAACAAGTTCACACGGTACATCTTTCTTAAGGACCTGTCTATGCACCCAAAACAACATTCTCCATGTACTGAATTGCATGTTTTGACTGGCCTTCATCAAATCCCTTAAACAAGGCATTATGTGTGCAGTGATCTGGATGGATACCATGCTGATGCATTTCAGAATACAGCCTTATAGCCTCTTCCCAGTTACCTTCTTTACAGTTCCCATCAATCAGCAAAGTGTACGTGTATTTGTTTGGCGACAATCCTCTTTCCAGCATCTCATGAAAATGCTGATAAGCTAAGTTAGTTCTCCCCATCCTGCAAAGTGCATGTATGAGCACATTATATGTTACTTCATTAGGTCGCACTCCTTCCTCCAGCATCTTTTGAAACCAACCATATGCTGAGTAAAGATTTCCTCTTCTACAGTATGCATGAATGAAAACAGTATAGGTCACAGCCGAAGGTGGCAACCCACTTACAAGCATTCCATCAAAAATATCCCTTGCTTCTCTCAGACGCCCCCTTTCACAATGTGCGTGAATCAAGCATGTGTACGTGATGCAGTCAGGCTGTAAACCGTCACTGACCATCTTCATCCACAACACATAGGCATCTTTCAAGTTACCAGATTTGCACAATCCATCAAGGAAAATATTGTATGTTACTGTATCAGAAGAAATTCCTCTTGAAATCATCACCTCTGTCAGCTGAAATGCCTCAGAAGTAGAACCTAGAATCAGCTCTGCAGAAATCCTTGTATTATAGGCAAAGCAATCTGGCTGCAAACCTTTGCTCAACATTTCATCAAAGAACTCTCTTACCATCGCAAGATTCCTCACCTTACGAGACCCATTCATGAGAATCGTGTATGTAGAAACATCAGGCTGACAGCCCTGCTCTACCATTTCCTGCTTGAATCTCCTAGCTTCCTCTAAATCACCTAATCTACAATAACCATCTAAAAGAATGTTATATGTCAAAACTGATGGGGCTAACCCCGCACGCTTCAAATCACCAAATAACCAAAGTGCCTCCTTCAAATTCCCTGCCTTACAATACCCATTTATTAAAGAATTGTATGTAATCAAATCTGGAAGTAATCCCATTGCTCTCATTTCCACAAACTTCATCCGAGCTGCCTCCACATTACCACTTCTAAACATTCCATGAATAATTGTGTTATATGTCACCACCGTGGGTACAATGCCCTCATTCTCCATCTCCAACTGCAATGCTCCAGCCTTTTCAACAGAACCCCTTGCAAAATACCCAGTAATAAGTGGATTAAACGTGAAAGCTGACGCCTTCTTGGACATCCGCATTCTGTCAACCAGCTGAGCTGCCTTCTCCAGCTCACCTTTCCTGGCCAACCCATTAATCACCACATTGTATGTGACATCACTCGGCAAGCATCCACCAGGCCGGGCCTCCATCTCTCTGAGCAACTTGGCAGCCTGATCCACCCTACCCTCCCTGAAGAAAGAATCCAACAACGTGTTGTATGTGACAATGCTCGGCTCGATTCCAAGCTGAAGCATCTCTGCATACACCGAGCGCATGTCATCCCACCTGGCTTCATCACGCAGCGCACGGAGCACGAGGTTGCATTCCTTGATGAAAGGGGGAACTCCGTGGTGCGCCATCTCACGGAAAGCGGCAAGGCATAGCGTCGAACAGGTGGAGGGCGCAGGGTTGCGAGCTCGGGTATTGAACTTGGTGGACAGGCGCAGGAGGAGGTTGAGGAGGTAGTGGAGGGAGACGGTGGTAGGAAAGGAGAGGAGGAGGGAGACAAGGGGGAGGAGAAGGCCGAGGTGGATGGCGCGGACGGAGACGGGGTGGGCGGCGTGGAGGTGCTTGGCCTCGGCGAGCGGGACGAGGACGGCGGCGTACGCGGAGGCGCAGCGCGGGAAGCCGCGCGGGGTGGCCTCCGCCCACCGGAACAGCTGGCGCGCGAGGCCCGGGAGGCCGCGGAGCGCGGCGTGGACGTCGCCAGCGGCGAGCACCTCTCGGAGCGCCTCGGGTGGTGGGGGATCAGACGCGAGCAGCGACGCGAACGGGCTCTCCTCTGTCCGAGGCGGGGGAATCAGCGCCGTCGACGACGACGACGACGACGAGGAGACGAAGCGGAGGCCGGAGATGGCGGCGGCGGCGGCGGATGCGGCAGGAGCTTGGGATTTGCAGGGGTGGATGGAGAAGAGCATGGGTTAATGTTCGAGTCCTCCCCGGCGGCGCCTCGCCATGAATGGCTGCGGCGGCGGGCGGAGGCGGCGCCGGCGGCGGGGAGGAGGAGGGGAGAGGAGGGAGTTCGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0116100.1 | 12 | 2592296 | T | G |
| Osa12LNT0116100.1 | 12 | 2592996 | G | A |
| Osa12LNT0116100.1 | 12 | 2593469 | T | C |
| Osa12LNT0116100.1 | 12 | 2594379 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0116100.1 | osa-miR5837.2 | Cleavage | 3.0 | 12.827 | 1 | 21 |
| Osa12LNT0116100.1 | osa-miR5837.2 | Cleavage | 5.0 | 4.776 | 1 | 21 |
| Osa12LNT0116100.1 | osa-miR156b-3p | Translation | 5.0 | 19.487 | 1 | 21 |
| Osa12LNT0116100.1 | osa-miR395f | Cleavage | 5.0 | 15.119 | 1 | 21 |
| Osa12LNT0116100.1 | osa-miR2095-5p | Cleavage | 5.0 | 10.589 | 1 | 22 |
| Osa12LNT0116100.1 | osa-miR2105 | Cleavage | 4.5 | 9.601 | 1 | 20 |
| Osa12LNT0116100.1 | osa-miR2868 | Cleavage | 5.0 | 15.852 | 1 | 20 |
| Osa12LNT0116100.1 | osa-miR5488 | Translation | 4.0 | 8.672 | 1 | 21 |
| Osa12LNT0116100.1 | osa-miR5511 | Translation | 5.0 | 17.113 | 1 | 21 |
| Osa12LNT0116100.1 | osa-miR2275d | Cleavage | 5.0 | 5.697 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0116100.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0116100.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0116100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116100.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0116100.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Osa12LNT0116100.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)