© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0116300.1
GCCGAATAGGGTTCATCCAAAGTTCCAAACTACAACACTGCAACTGAACATCACATTCAGTAAGCATAATACAAATATGTAAAACACCCTATCTGATAATTATTGTCTACTCCCATACAATACAAAGATATCCATGTGATGTAGGATGGCTAGAGCAGTTCCACAAGCAACAGCTTCGTCAGGCCTCAATTCTGTATTCAGCTCCCATCAAAGTAATCCTTGATAATTAGTTCTTGAATCTTTGGGATCATTTTTCTTCCACCAATGACAACAACCTCATTTGATCAGATTCTTCTTGTTGTTCAACTCTGTTGTCATCTTGGAGGTACATACGGATCAATTTCCATTTGATCATCACATCAGGCTCAACCAATTATACCAGCATTGAATCCACTGTAAAAGGTAACCTGCTCCGCAGCCAAAGATGAAATTGCCTTTCAAAGTTATCTTCTCTGCAGCCAAAGATGAAATTGCCTTTAAAAGTTATCTTCTCTGCTGCGTTCATCGTCTTAAGACCAACTTTACTGTAAATTGAGGCTCATCAATCCAAGAGAGTTCAACCTTTGTATCTTGACCATAGCATTTTATCTGACATTTTTTACACTGAACAATCCAAAACATTTTATCCGACACTTTTTACACTGAACATTAATCCAAAAGAGAGTTGAGCCCAGTGTTAATGGTTGCTGTCATCACCTATGATGGTGGAGCCTTCCGGTATGCTGTCATCACCAATTAATTAAACATAACGTGCATGATTACTTTAATCTAGAAGGGCCACCGTTTGTGGATTAGGCTCAACACCAACGACGACATAGGCTATGAAAAAGAAAAAAAAAAGGAGTGCCAGAAAACCAACCCAACCAATCTGATGAGCCCATTTGAACGAGAAATTTCTCCATTTAACACGAGATTCAAATGCATAACTGTAACAGTTGACACAGGCCTTGTCATTCGACTCTACTACACTACAACAACCAAGCTCAACTTCGAACGATGCTTTTGCTGCTGCTGCTGCTAAAAACCAGGGTAGTGAAGGCCGCATAAACTGTGTACAGCATGCGTATTTAAGCCTAAAATGCTGCAATGCAACTTAACTGCTTCATATAGTAACATATTACTCTGTACAGATCCAGAGGGAAATGTAGAAATTCGTGTTATCACAAACAGTTACTATATTGTATTTTGGGACAACTGTCATGCAACCCTGTAGAACATCTCTGCTGTCTCCCCCATAAGAAATGTACAGGAGAACGAAAAATGTGATGACAAGTGTATATTGACTGTAATCTATAGCTATGACAATGCTGAGTTTCTAGATGGCAAATCTACGGCTTCAGCACTAAACGAAGACGCCAGGCAAGGTTTCCTTTGTATATCATACCTGCATCACCAGAAAAACTTCACAGAAGAAATTGTCATATAAATCGCAGGTCACGTACTATTTCTCACTGCCATCCTTCTCGTCTAATGCTCCATTAGGCTTCTCAGACCTTACTGGAAGAACGCTGCGCCGCTCTTTGCCACCTGGTTTAGCTGATGCATTCCCATACCATATCATCCCAACAACAGCAAGGATCATCCCAAGGACTACCTGAAAATTCAGACCTTCCTTGCCAAAGAAGAGAAACCCAAGGGACAAGACGAGCACTGTCTTCATGTGGCCCAGGACTTGGAAGGATACGGCAGAAAACCGACCAATGCAGATAAATTGGCTCAGATTAACACCAATGGCAATGACACATGAGAGAGTCAGGAAAAACAAAGCAATCGATGTGAAACCAAAGTGATCCACTCTTTTGCCTGTCAACAAGAAATCTACAAAGGGCCCAACTAGCAGAAGAGATCCCGCTTGGGCTGGAGCAGTGTGGCCCAGGAGGTTGAATGAGTTCAGAGAGTACTTCCTTTGGAGAAAATGAACATAATATTGTTGTAAAGCTGTGCTCCAAACAGCTATAACAGCAGCAGCCAGACCTTTTGCATTTACACTGACATCAGTAACTGTGCAGACTGCAACACCTATAAGCACAACCATTATGCTCAGCTTTGTGTCCCGGGAGTAATGTACACGATCGAAGACAACCTCCAGGAGACATGATGCAGGTATCATGCACAGCTTTGCTATCTGATAAAATCCCACAGAGTTCCACATCAAGCTCACATTCATTCCAACAATTGACAAGTTCGAAAAGATCACAAACTTAATCAGATCTGGTATTGGTAAGTGGGAGGGCTGGCTGAGGCCTAACCACCGAAACACGATAGTCATCAAGGTGGTTGTCACAAAATGAAGACCAGTTAATGTTGTGGCGAAACTGAATCCATGTGTAGCCATCAGAGCCTTGTTGACCATGATGATTCCAACGGATGTGGTGATGTTGAAACTCCATGCCGCAAAATCTAGCACCTTCTTCTTGTCGGATTTGCTCATGGAAGAAGTCATTTCGCTCGAATCCTTGAGGCTTCAAATCAACACCAACACTTTGGCAGGGGAGGACCGGAAGCACGCCGTCGGCCGGCGCCGCTGGCTCGAGGGGTGATGGATGGAGATCGGCGAACTCGCTCGCGAGTCGAGAGGCCGAGGTGGCGGGTGGGGAGAGATTGGCTTGGGCGCGGCGAGGAGGAGCCAGAGGCGAGGGTACGCGGCGGCGGGAGCAGCTGGACGCCGCCGGGCACCGCCGCTCGCGTCGCGGTGGTGGAGATCGCCGCGCGACGGCGGAGGCGGCGGCGGCGGGCCAAGGAGATTTTGCTCGTGTGGTGTTTTTTTTTTCTTTTGTTTTATTTTTTTTTTAGCGAAATGAAAACAAGTGTCTCCAAATCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0116300.1 | 12 | 2664192 | A | G |
| Osa12LNT0116300.1 | 12 | 2664293 | T | C |
| Osa12LNT0116300.1 | 12 | 2664673 | G | A |
| Osa12LNT0116300.1 | 12 | 2665650 | G | T |
| Osa12LNT0116300.1 | 12 | 2666404 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0116300.1 | osa-miR5528 | Translation | 4.0 | 20.858 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR1437b-5p | Translation | 5.0 | 16.314 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR156k | Cleavage | 5.0 | 16.267 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR160f-3p | Translation | 5.0 | 14.64 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR415 | Cleavage | 4.5 | 16.454 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR418 | Cleavage | 3.5 | 12.736 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR1873 | Cleavage | 5.0 | 22.434 | 1 | 24 |
| Osa12LNT0116300.1 | osa-miR2864.1 | Cleavage | 4.0 | 24.96 | 1 | 21 |
| Osa12LNT0116300.1 | osa-miR5083 | Cleavage | 5.0 | 9.257 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0116300.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0116300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116300.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0116300.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0116300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116300.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0116300.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)