© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0116500.1
GCAAGGGCCCCCGTACTGTAAGTAGGGTTTCTGGAAGACAAGAATGTAAAAAAAACCCAGGAAAAGGGGCACTCTGATGATTCATGGAAGGAAGATTGCCCGGGAAACAAGGGATCTCTCCCCACTTCCTTCTTCTTTTTTCCCTTCCAACAGGTCAATTCAATCGAACCTGTCACTTGGTTCAGAGTGTAGTAGTAGTAGGCTGGTGGTAGTAGTAACTAGTTTCACTGTTGGTGGTTAGGATTCTGCAAGCAAAGGCCTCAGATCTCCTCATCATCTCATCAACTAGCTGCCCCTGTTGTGCAAAAACAAGAGAATTGTTTGAAAACCTTAGAATTAACAATTGAATTTGATTTGGAGAAGTGCTGGTCGTTGCTGTCATTTGATTTCTAGTTCGTTCTCTACTAGCTTAATGCTGCAACTGTAATTCTAGATGGCTGTTAAAACTGAAAAAATACTGACCAGTAATTTGGCACTGTAGACACTGCGGCGTAGGGGCTCTGGTGGTGCATGTAGCCGTACATTGCCGTCGCCTGATCCGCCTCCGGCTCCGGGCCGCAGTCGAGGTTAACGCCGAACAGCCTGAGCCGCCTCGACGGCGGCGGCGCCGACGCCGCGCTGCTGCTCTTGGCGTCTGCTTCTCTCTGCGACTCTCCTGCAAATTGTTCCACCGCGAAAGTTTGTCAGCCTTTGGAGAAACCGGAGGGCCCAAGATGGGGCGTTTTTTTGTCCAGAATCCAATCATAACGGTGATTTAACGGATCTCCTCATAGGCAAGGCATAGCATCTGGACAGTGCATATGCATGCACTGGCTGTGAATTGTTGCCCCAAGTGCATCATATTTAAAGGTGGCAATGAGGATCGGAGCTAGGGAGCCACGCAGCAGGTTCTTCATCCTACAAGCTTCAATCATGCAGCTCACCTGCCCAATCGTTTGATAATTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0116500.1 | 12 | 2835635 | T | A |
| Osa12LNT0116500.1 | 12 | 2835650 | T | C |
| Osa12LNT0116500.1 | 12 | 2836219 | G | T |
| Osa12LNT0116500.1 | 12 | 2836288 | C | T |
| Osa12LNT0116500.1 | 12 | 2837142 | T | C |
| Osa12LNT0116500.1 | 12 | 2837882 | A | G |
| Osa12LNT0116500.1 | 12 | 2838054 | A | G |
| Osa12LNT0116500.1 | 12 | 2838271 | G | A |
| Osa12LNT0116500.1 | 12 | 2838508 | A | G |
| Osa12LNT0116500.1 | 12 | 2838653 | G | C |
| Osa12LNT0116500.1 | 12 | 2839222 | G | A |
| Osa12LNT0116500.1 | 12 | 2839365 | A | G |
| Osa12LNT0116500.1 | 12 | 2839537 | T | C |
| Osa12LNT0116500.1 | 12 | 2840021 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0116500.1 | osa-miR5535 | Cleavage | 3.0 | 17.827 | 1 | 22 |
| Osa12LNT0116500.1 | osa-miR5801 | Translation | 5.0 | 20.102 | 1 | 24 |
| Osa12LNT0116500.1 | osa-miR395a | Cleavage | 4.0 | 23.64 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 20.009 | 1 | 20 |
| Osa12LNT0116500.1 | osa-miR319b | Cleavage | 5.0 | 20.009 | 1 | 20 |
| Osa12LNT0116500.1 | osa-miR444a-3p.2 | Translation | 3.5 | 17.496 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR444a-3p.1 | Translation | 4.5 | 23.234 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR444d.2 | Translation | 3.5 | 17.496 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR444d.1 | Translation | 4.5 | 23.234 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR444e | Translation | 3.5 | 17.496 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR444f | Translation | 4.0 | 17.496 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR1858a | Translation | 3.5 | 22.712 | 1 | 21 |
| Osa12LNT0116500.1 | osa-miR1858b | Translation | 3.5 | 22.712 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0116500.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0116500.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0116500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116500.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0116500.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Osa12LNT0116500.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)