© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0116800.1
CTGCAGTAAGTCCTATATGCTAAGGGACCAAAAAGGCATAAACCACTTACAAAACTGACAATATAACACAAAATGGATCTGTAAATTATAAATAAAAAAGGGAACTGATATTACCTCCAAAACAGAGACAATTTCATAAAATAAAAAACTATAACAGCGCTAAGTGAGTAATGCCTTCTCCAGCGTAACCTGGAAGGATAGCCAGTCAAAAATAATGAAAAAACGTTGGATCTTGCCAGAATGGCATCATATGGAGTTACAATTATGCTATTTAAGTAATTTAGCATCACATATTTGATGAAGGAAAATAAAGTTAGTTGTTGTAGAATTTCTTGTTGGAAGTTGTCCTGCAGAACTTATTAGCAGTGCTCTTCCCTTTCTCCAGCTTTGATGTTTATCGCTTTTGTTCACCAAATTGCTGTCCATCAAAAAACTCACCCAGAGCCTGATCTATATTCTCTGGGGAGTATCTGATATACTTATTTGGGTTCTTCCCATGTTCAACGAGATTTCCAAAACGTTTGATGAAAGACCGATAGGCTGGCAAGAGAACTTCAGCAACAGCAAGTCTCAGAGATTCTCGCAATTCTTGATCAGGTATAGTCCATTGAGTTTGCTTAGCATGAAGCTCTTCAAATTGCATATTGAAGGACTTAAATCGCTCTTTGATCATAGCTCTTGAAACTCCGCTGCTACTAAGTTCAGCTGGTGATGAACCAGTAGCTTGAACAGAGAGTGTCTGAAGAATCTTTGCCCATGCAACCCTTTTGTACTGGTTGGCATTTTGCTGTACAACCCTACGGTGCCTCTGAATCCAGTCGTCACCGAGTATATCCTTGGCTTCTGATCTGCGGACAGATCTAACCATATAGTGAATGTTGTTCATAAGAAATATATAGGTCAATGCAGGATCCTTATACTGCTTAGATTTCCCATCTAAGTTATTCTGAAGGGCTTGCATTATCTTCATTGTAACAACTGCAAGTTGAGATTCAGTCTCACTGCCAGTTTCAAATTCCTGAAAGAGTATCTTCAGTGTTGACTGATAATCAAATAGAAATTTGACATAATTAATAACATAGCTAGTCAAAGGATGGACCGTCCCATCCTGCACAATAGTCTTGGAAGTATCCTTTTCAACTGCCTCCTCAAAATCAGCAAATGTTTCTTGGGCTGTCTGTGCCAAGCGCCTAGTTAAGCCTAATGCAGCCTCCCGCATCTCAGAGCAAAATCTGCCTTCAAAAATTTCTTCAACCTCTGGCTGGAGTTCATGCATTACTTCATACATGTCTAGCAATACAAATAATTTTTCAGGTGATCTTTTACTTTTAGCAACAGCATCTCCAAAACTGAGAAGTGTCAATACGCTACTTCCTGCCAGTTCAGCAAAACATTGATCCTTGTTGAAATTAATACCATCAAAAACCTGGTCACAAATTCTCCGTTCTCCAGCAAGTAATAATTTGACCGCAATTCGCATAAACTGGGTCCAGTTTCCAATTTTAGCCTCTAAGGCTTCCCATTGCATTCTTTGCACATCATCCTTACTAAGCTTTTCTACGCCCAGTTTCCGTAAGCTCACTTCTAAAGCCGAACCGCGAGAGTCTCTGTAGATTCTATAGCATGACTGCTGATTTCCAGCCTGAACGAGTTGCTGAGCTATATCATGCAGAAGTGGTAATATTCTTGGGGGCATCAGGGTTGGAGTCCTACATATACCAGTCTCCAAGCCTTTGGATGGATGTTCAGAGTGAGTGTGTCCTCCATCAGCATCATTGTCATCTTTTGGTGCTCGTGGAGGCTTTGGAAGGCAATCAAATAGGCGATCAGGTTCAATAGGTTTGCTGTATGTAGTCATCAGCTGCTTGAATTCCTCCTCAATCTTGAGAGCAGACTTGGACAATATATTGTTGACGCGATTCAGAAGTCCATCGTTGTTCTTAAGGCTCTTGTTCGAGGCGAAGAAGCAAACAATGCTTTTCAGCAGATCCACAGCTTCTAGGTAGCCCTCCAGATCCTCATGGGGGCCCCTCAGTATCGTAGCTTCAGCCCGGCGGGCAAGGTCGAACTGGGAGAGGATGGCGTCGGCGGCCTTGATCGTCTTGTCGATGTTCTCGTGCGCCATCCGGATCGCGTGCGTCCTCACCTGGGTGGGGCGCATGGCGGCCTCGAGCGCGGAGAGGCGGTGGTCGAAGGACCCGAGGATGGCGACCGTGCTCTCCGTGTTCCCCTGGCTCCTCCCCAGCGCGTCCCGCAGCGTGCTCGCCCGCCGCGCCAGCGCGTCCATCACCCGCGGAAGCTCCGCCACCCCCATCTCCCCACCTCCGCGTGGTACGAGGAGAACCTTCTAGAAGGTTCCGGAAGGAGGATGGAGCAGCGTCGACGGCGAACGTCTCACCGCCCGTGCTCCCGCCGCCGCGGAGAAGGAAGGGAAGAGAGAGAAGGGGGGAGCTTGGAGATTCGTGCGGGCACTGACGCGTGGGGTTTTGCGGTTGGGAGTGGACGGTGAGGATTGGGTGGGGTGTAGGAGAGGGGAGAGGGGAGGTGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0116800.1 | 12 | 2986716 | T | C |
| Osa12LNT0116800.1 | 12 | 2987333 | G | A |
| Osa12LNT0116800.1 | 12 | 2987732 | A | G |
| Osa12LNT0116800.1 | 12 | 2988987 | C | A |
| Osa12LNT0116800.1 | 12 | 2991468 | A | G |
| Osa12LNT0116800.1 | 12 | 2991878 | C | G |
| Osa12LNT0116800.1 | 12 | 2992081 | C | A |
| Osa12LNT0116800.1 | 12 | 2987694 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0116800.1 | osa-miR5802 | Cleavage | 3.5 | 15.3 | 1 | 24 |
| Osa12LNT0116800.1 | osa-miR169p | Translation | 4.5 | 21.055 | 1 | 22 |
| Osa12LNT0116800.1 | osa-miR393b-3p | Translation | 5.0 | 22.167 | 1 | 21 |
| Osa12LNT0116800.1 | osa-miR444a-5p | Cleavage | 4.0 | 16.303 | 1 | 21 |
| Osa12LNT0116800.1 | osa-miR1425-5p | Translation | 4.0 | 19.861 | 1 | 21 |
| Osa12LNT0116800.1 | osa-miR1430 | Cleavage | 5.0 | 19.174 | 1 | 21 |
| Osa12LNT0116800.1 | osa-miR1847.1 | Cleavage | 5.0 | 20.18 | 1 | 21 |
| Osa12LNT0116800.1 | osa-miR2118o | Cleavage | 4.5 | 20.894 | 1 | 22 |
| Osa12LNT0116800.1 | osa-miR5505 | Translation | 4.0 | 22.531 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0116800.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0116800.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0116800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0116800.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0116800.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Osa12LNT0116800.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)