© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0117000.1
TCTAGATGTTGTTCCATACATAGGAATCATTAATAACAAGTTAACAACAGCTACGAGACTTTGTTCCAGGATACGTCAGCCTGAACTATATAAGCAGGCTTCCTTCCATGACAGACAGATTCAACTATCTACATCAGCATAAGAGATGTTATGTATCTCTATGCACAAAAAAACCTGAAACCTGTAAACTGCTTACCTACCTCCTTCGGATTGACACAAACAAACGACAGTATATGCAAAAGCCAGCCTAAGTTCAGATCAAGGGAAGCACATTTGCTACCCCTTTGCCGTTGTTGCTTGGCTTTGGCCACAGCCGGGCCCATATGTCACCCTTGGCATCGTTGATATCAGCGCGCCCTCGCGTTCCAGCTCTTGCATGAGTTGCTCAAATCTTGGAGTTGGCTGAGCAACAAAAGCAAACATCCTGCCTTGGGGAATTCCTAAGCTTGGGTCGATCTGTTCACGATTTGCCGGTTGGGTAGCAGCCATTGAAGGATGATTGGCCCGGGATGCGTTTGATCCACCGATTGGGGGAGCCATGTTCCGGTCAGCTGCGTCTTGCATCTCCGCTGCTTCAGGGTCTTGAGGTTCAGTATCCATGTTGGGATCCGGAACACCGTGAAATTCAACTTGTTCTGTGCCATCCTTGGAACCCTCCTGGTTCTCTAGACACATGGCATGTGCTGCTTGTTCTTCTGCTACGCCAACTATATCTTTCCTGGGCCTGAACAACCCCCACAGGTAGTGTTTTCCTTGAAAGGCTTGGTACTGTTTAGGCAGCATTGTCGAAGGGAATATCAGCATCTCCGTTTTGCCCATGACAGCACGTAAGGCCAGATCATACTCAATGACTTCCTTAACTAGTTGATCTAGTTTTCCATCAGGTCTCATTTTGGGTGGAAATAAAAACAAGGCAATGTTTTCATCAGTGAAACTTGATGTCCCCAAGCTTGCTGGCCAGACCTCTAACCTGGAATGCTTTGTCACGTTGACCAAGGCACGCAAAGATCTTGACAGCATACATACATTCTCGCACGATTTGGTTGACAAATGTCCAGCCAATGGTACATATTCCTTGCTGTCAATCTTGAAGATTCCACTCCAGATAGGTTCATCGACGGGTAAGGAGCAATGGCCCTTGATAGCTCCTAAAATAGTTGGTATTGAGACTCCATAAATACCATCTTTCACTAATCTAGAATCTTGACCGTCTTCATAATCTTCAAATCCTCTACATTGCGTCTGAACTATAGAACCATTTGAAGCCAAATGTCTTGACTCTTCACTGACATCAAGATTTTTCTTGTGCTTTTTTCCCATTTGTCCGTTTCTTCCTTTAGTGGACTCCACATTGCCAATATCATCTTCCTCCCTACCCAACACATTTGGAATTCTTCCTTGGATACATCCCTCCAATTTCCTTTTGACGAGTTTGAATTCGTTCACATGATCAACAGTAGAATGTTCACTGCACTCATCGCTTATGCGTAGTCCACCATCCTTTCCATCTCTCAACAAGTCCTCACTACACATTGGGCGAGCATTCTTCTGCAAAAGGTTGGGATGTTCTTTCGCCACTTCCTTGTTTCCTCTCTCTTCTCTCCTAGTTGAAGGTTCACTTCTCATTTGATGGGCATTCTCATTCTCCCCCAGATGGATCTGATGGTCATGCGTCACTTTTTTATTTCCACTCTCTTCTCTCCGAGTTGAAGGTTCCCTACTAATTTGGTGGGCATTCTTCCTCGAATGGTCATGACGATCATGTCTATTTTTTTCCTTTCCTCTATCTTCTCTCGTTGTTGATTGTTCAGTTCTCACTTGGCGAGCATTCTTCCATGAATGATCACGACAACCTTGTGTTGCTTCTTCCTTTCTTCTCTCTTCTCTCCTTGTTGAAGGTACACTTCGTACACCTTTTGATGGAGAAAGCATGGGCAATCTAGAAGGGGGCGATGTCAATACCTTACTTAATTTGCTAGAAGTGTTTGTCGTTGCATTGTACGGTTTGCTAGAAGAGAGACTTTCCTTCCTATTTGATTTCTTGGGTATTTCCTTTGAAGCCACAGTAGAAGTCACTCCATGTGTTTGAGCCTTATTCCTATCATCATTTCTTCTATCACCATTGACATTTCCTCTTTTGTTGGGTTGCCGGTAATAAAATTGGGATTTCCTCACATCATTCGCAATCCCATTCATTACTTTAGACTTAAACCCTTTGCTCCTCTTTGATCTACAATTTTTCCTTTGACTAGGACCAAAACTAGATCGAGTTGAATTTTTCATCTTGCTTGCTGCCCAACCCCACCGGCCGGCCGACCACCACCACCACACGAACAGCAACGGAACGGAAGACGAAGCAGCACACCAACAGCAGCAATCTCACGGCCGCATACACCCCATCCCGTCCGCCACCACGAACTCCCCCCAAAACCCGAAGACGGCGGCGGCGGCGGCGGCGATCCGGCCTAGCAGCGGCCGCAGCAACCGCCGGCGAGCGAGCAAGCGAGACGAAGAAGCGAGGAGAGGAGAGGAGGAGACGCGAGAGGGAAGAGAGAAGAGGAGAGGAGGGGGGAAGCGAGAAACCGAAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0117000.1 | 12 | 3109709 | C | T |
| Osa12LNT0117000.1 | 12 | 3103447 | A | G |
| Osa12LNT0117000.1 | 12 | 3101103 | T | C |
| Osa12LNT0117000.1 | 12 | 3102439 | T | C |
| Osa12LNT0117000.1 | 12 | 3103552 | A | G |
| Osa12LNT0117000.1 | 12 | 3104217 | G | A |
| Osa12LNT0117000.1 | 12 | 3103197 | T | C |
| Osa12LNT0117000.1 | 12 | 3104850 | G | A |
| Osa12LNT0117000.1 | 12 | 3105803 | C | T |
| Osa12LNT0117000.1 | 12 | 3106188 | A | G |
| Osa12LNT0117000.1 | 12 | 3106434 | G | T |
| Osa12LNT0117000.1 | 12 | 3106881 | A | C |
| Osa12LNT0117000.1 | 12 | 3106930 | A | G |
| Osa12LNT0117000.1 | 12 | 3107262 | A | G |
| Osa12LNT0117000.1 | 12 | 3107461 | C | T |
| Osa12LNT0117000.1 | 12 | 3108581 | T | G |
| Osa12LNT0117000.1 | 12 | 3109182 | C | T |
| Osa12LNT0117000.1 | 12 | 3109814 | G | A |
| Osa12LNT0117000.1 | 12 | 3110133 | A | G |
| Osa12LNT0117000.1 | 12 | 3110266 | A | G |
| Osa12LNT0117000.1 | 12 | 3110369 | T | G |
| Osa12LNT0117000.1 | 12 | 3102636 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0117000.1 | osa-miR5798 | Cleavage | 4.0 | 19.404 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR5804 | Translation | 4.5 | 13.752 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR818f | Translation | 5.0 | 16.51 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR156k | Cleavage | 5.0 | 9.343 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR156l-5p | Cleavage | 5.0 | 14.41 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR169d | Translation | 4.5 | 9.315 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR2091-5p | Translation | 5.0 | 12.066 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR5144-5p | Cleavage | 4.0 | 18.193 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR5152-5p | Translation | 5.0 | 9.771 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR5340 | Cleavage | 4.5 | 11.288 | 1 | 23 |
| Osa12LNT0117000.1 | osa-miR5492 | Cleavage | 4.0 | 11.351 | 1 | 21 |
| Osa12LNT0117000.1 | osa-miR5500 | Cleavage | 4.0 | 17.887 | 1 | 22 |
| Osa12LNT0117000.1 | osa-miR2930 | Cleavage | 3.0 | 4.53 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0117000.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Osa12LNT0117000.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0117000.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0117000.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0117000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117000.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)