© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0117100.1
CAAAAACCAATAGCTACATTGGAAATCCCAGTCAGCTACACAAAACAAACATGTACAGGCAACAGCTAGAGAAAGAAAGAGAAACCGTCAGTTCCGTAAACGCTACAGTTTTTATTCACAGACAAAATTATTGAGGCTGTCCAGAACTTCAGCAAAACACCAGAATCACAGGAGCTGCTCATCATGGCAGCTCTGAAGGTGCTCGCCGAAATGCGCCAAGGCTCAAGTCCAGTTCTACTTCTTTAACATCTACCTGAGAAGTCAATCCAATCTGCTCATGCCGAACCGGGAACAGATCCAGGCAGGCTTCAGAAGCCGAGTCGGGGTCATTGTGATCAATCGGAACGAATTCAATGGGTTCACAACGCTCCTGCACATGTTGACAGCCACTGTCAGGGGCCTGAGCTGCTCCTACTCCATTGCTCTTGCTTATGGTAGATCGATTGATCGTCATATCTTCCGGCACCGAGAATAAGAGAGCACCTTCCTTGACCATCTCCTGGATGAGTTGCTGACATCTTTCAGACCGTGCTGTAACGAATCCAAACAGTCTGGTCGCGGAAGGTAAAGAGTCGATTGGTGGATTGGTAGCATTTTGATCATTCCTTCTAGGTAAAGAGGTGAAGTCTTGCTCATCTTCTTTCTGGTCTGCTACACCAGGCTCATGAGGTTTATCGCCAAGTCCTGGTTGCATAAAGCATGGTGATCCACCCTTCACAGGGCTTGCCTTATTACTTGACAAACAGCTATCAGGTGAGAAACAACCTTCTCCCAAAGCAGTTTTGATGTCCCCCTCCCGTGCCTCCGGGTTACAGTCTGCAGGCAATCGATCCTCGACATGTTTCATGACATAACTTTCTTTGTCCGATGACCCTTCCTCCGAGGCAGAGACCAAGCCACATTGTTCTTCAACAAGAACAGCTGTGTCAGGATTATGTTTCCTGGCCTTGCACACTCCCCACAGGTAGTATTTCCCCTGGAACTCATGATATTGTTCTGGTAAAAGAATAGAGGGGAAGATTAGTAGCTCCACAGTTCCTAGAACAGCTTTTAAGACAACATCACTCTCAATTACTTCTTTCACTAGTTTATCTAATTCTTCATTTGGCCTCATACTATGCGGGAAGAAAAACAACCCAATGCTGTCGTCAGTAGGTCCTGATTTGTCCCACCTCTCTGGCCATGCTTTCAACCTAGGGAGCTTGATTACTTCAACTACTGGTTGCAACGATCTTGCAAATTCCGACACTCTCTGGCATGCTTTAGTTGATAGGTGTGCAGCCAACATAATAGGCACATTGCTATCTGTCATAAAGATACCACTCCAAGCAGGCTCACCCATAGGCTCTGAGTAAATATAATACTGATGTTTGGTGAAATCTGAAGCAAATGCCATTCTGGACTGCAGATGGTGGTCCTTGGCATCTACATGTTGTGAAGCTGTATTTGCAACATCATTCGGAGCACATCCAGTGGTCGTAGAACCTTTAATAACCTCTTCTTCTTCATCGTCACTTGGACATATGTATCTCCTCCGTTTCTTTGTGGGACAAGTGTTCTCCAAAGACCGGTGATCCAAACTATCCAGTAGTCCATGTTCATCATCTTCTAAACATCTCTGCCCTGTGGCATATCCAATGTGTATTTTATGCTTCTCAATTGGTCCTTCAAACTCAAGAGATAGGTGATTCAGATTTTCAGCATCCTCTTGTTTGTCATCATCATCATCTAGTACAATAAGCTGTATTGTCTTCCCTGGGTTGTCCTTTGCAATACTTTGAACAGTATTGCAAAGTTCCACCTCTACATCATCATCATCAGGTAAAATGAGTTTTCTTCGTTTGCTTGGGTTGTCCTTGACAACATTTTGAACAGTATCAGACAGTTCCACACCTACATCATCATCATCATCATCTAATAACATGAGTTTTCTTCGCTTCATTGGGTTGTCCTTACAGAAGTTCTTGACAGCATCAGAAGGTTCCATATGGGAAGAATTGGCCTCACGATCAATTTTCTCTTTCGACGAGTCTTTTGACAAGGAACCTGAACAAGCCCCATCTAGCAGCATTGAAGATTCTCTTCGATTTTCCCCTGTTAATATTAGTCTCACACTACTGTCTCTTGGATTTCCAATATCAATGTGTGCAGATGGCACACAATTGCTATCCATCGGTAGCCCTGTATTTGCTGAGGATGATACGTTTCGGGCCACAGAGTTTTCATGCAAAGTGGAAGACCGGGGCACATTAGCGGACATACTTTTCAGGTGTATATCATTGTTTGCCTCGTCATGCAACTGAAATCTTTCCTTATTTCTCTCCAACATCAAGTCATCACTGACATAGTCATCATTACCACCATTCATCCCAGGCTTGTCGTGGTTGGTATCCAGTGATGACTGATTTTCTGGCTGCTTGCCAACCACTGTTTTATCATCTAAAGTCACTTCTAAAGATCTTCTATTAGTACCTTTGCCATGCCTAGGATGGCATTCATCACATGACCAATCTACTGTCCCATCAAAATCAACTTTGTCCAGACAGTATCGGTGCACAGCAGCTCCGTTGCAGTTTTTGCAAGATAGCAGAAGATTTTTGTAACCAAGAACTCCACAAACTTCGCATACAGTAATCATTTTCCAGCACTTTGTTCTGCGACGCCAAAAGAATCACCAAGAAAAAGAACCGGTTCCAGCCCTGCACCTCAGATGGATTCCGAAATCCGAAACCGAAGATCTCTCCAAGAAAACAGAATCGGAATCCAACCAATGGAGGCCCCAATAAACCCGTCTCATCCCATCTAAATCTCCATCTCCTCCTCAATCTCTCCTAATCAACGAACCCAAGAACAGAACAGAACGCCCCCGCCCGCGGTGCAAGAAGAGAGATTCTGCAGCCGCGAAATCCGCTCCAAAAGACTGAGAGAACCTTTCTTGGACCCCTTGTCACTCACGAGCAAACAGGAGAAGAGAGGAGAGAGCGAAAGATAGAGTGGCACTGTGACCAAAGGAGGAGGAGGATGAGCACTGGAGCAGTAATAATGGCGGCTTTCCTCCTCGGATTATACTGGAGTATTATCGATTTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0117100.1 | 12 | 3118112 | T | C |
| Osa12LNT0117100.1 | 12 | 3118837 | A | G |
| Osa12LNT0117100.1 | 12 | 3120672 | A | G |
| Osa12LNT0117100.1 | 12 | 3121593 | T | A |
| Osa12LNT0117100.1 | 12 | 3121642 | G | A |
| Osa12LNT0117100.1 | 12 | 3122882 | C | T |
| Osa12LNT0117100.1 | 12 | 3124767 | C | T |
| Osa12LNT0117100.1 | 12 | 3122047 | T | C |
| Osa12LNT0117100.1 | 12 | 3122851 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0117100.1 | osa-miR5528 | Cleavage | 5.0 | 13.421 | 1 | 21 |
| Osa12LNT0117100.1 | osa-miR5829 | Translation | 4.0 | 15.971 | 1 | 24 |
| Osa12LNT0117100.1 | osa-miR169i-5p.2 | Translation | 4.0 | 4.085 | 1 | 22 |
| Osa12LNT0117100.1 | osa-miR172a | Cleavage | 5.0 | 17.1 | 1 | 21 |
| Osa12LNT0117100.1 | osa-miR172d-3p | Cleavage | 5.0 | 17.1 | 1 | 21 |
| Osa12LNT0117100.1 | osa-miR417 | Cleavage | 4.0 | 17.497 | 1 | 21 |
| Osa12LNT0117100.1 | osa-miR1851 | Cleavage | 4.5 | 23.404 | 1 | 21 |
| Osa12LNT0117100.1 | osa-miR2093-3p | Cleavage | 4.5 | 17.051 | 1 | 20 |
| Osa12LNT0117100.1 | osa-miR2867-5p | Translation | 5.0 | 19.812 | 1 | 22 |
| Osa12LNT0117100.1 | osa-miR2868 | Cleavage | 4.0 | 13.705 | 1 | 20 |
| Osa12LNT0117100.1 | osa-miR2873b | Cleavage | 3.5 | 16.844 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0117100.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0117100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117100.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0117100.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Osa12LNT0117100.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0117100.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)