© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0117200.1
GCAGAGCAAATGATAATAACATCTTGGTTAAAAACTTCCAAGCGTTCAGGTTCCAGAATTCCTCCTTATTATAACTCTAGAACTCTAGACTTTGTTAACCATATGACATCATAAGCATTCTCCCTCAACTGGGGAGAACAAAAGAATGCTACTTTGTTAGATGACTCCTGCCGATATTATAGCAGCTGAACCTACAGTTGACAGATAACCATAGGAGTGCCATTTTGTTTGGTGTATGATTCATCCAAACAAGGAACACTCTGCTTTCAGAATGTTACCAGGCTAATGCTGCAATTTGGGGATGAAAGCAGCAAGTCAGCATTGATGCATACAACAGATTTCAGTTGTGCAACTTTGAGGTCCGTGCTTTTTGCAAGCTGCCCAAGACGCTCTCAACTAGCTTACCCTTCTCTGTATCTTCTTCCGAGTCTGACACGAAAGAGTACTGTTTATGCTGTGGCCTTGTAGGCTTCGGTGCATTTCCTCCGGTCAGATTGTCAAGATAGCCATGGTCACTCCTTGAACAATCAACAAGCCCATCAATGTCTTGAGTTTTTTTGCTAGAGACATCCTTACTATTGTGCCAGGAATCAATAATTTGGAGGAGCGAGCTTGCTTCAGCCTCTTTTCTAGGCTGCTGGTCTGCATGGTTCTCATCCTCTGAAAAATCATCATCTGAAAGAGTAGGAGGACGGTAGCACATTTCTTTGTCAACAGTTTGCACAGTTTCAGTGGTAGCAGATACAGGACCAAGTTCCTCCCAAACAAAGTCATCGCCATTACTTTGATTTCCATTGCCCTTGCTGCCAGCTTGGCCATTTCCGTTTTCTGCAGGTAGAACCCTTGGAAATTTTACTCTCACACCAGGCATAATCTGCAACAGGGACTTAAGGTCTGGATATCCAAGCTTTTGAGGGTCTAGCTCATATCCATGCTTCTGAGCAAAACGAAGCTTGAAAATGCTGATGTTAAAACCATATTCATATTCCAGAAGAAGGTCCTTTAACAGCTTGTGACAGTCCGACAAAGTTTCCTCCCTAGGGAGAGGACTGTTTGTGCTTTGATCACCAGTGTATTTGCCCGGCAATGGCTTCCCATTGGAAAACAGAGAACTGAGACCATCAAACTTCCTGGAGTTCGATGGAATGCATGTTCTCTTGTGAGGAAGGGTAAGACGAAACGGAAAATACCTGGAAGGGGTTTCTTCAACCCATTTCTTCTCTGAAACTAAAATATTCACCAGCTGATGGAGATCTTTCTCAGCTAGGCCTTTCAGAGGCCAACAATCTAATTTGTGCAATTGATGCACTAACTCCTCCCTTGTCTTTGCTTTTGAAACAAGCTCAGAACCAAGGGGCTTTGATAGCTGTTGCTGCAAAACATCCCAGAAGAAAGATTTTGTGAATATTTCATGAACCTCCTCTTCTCCACTTCCACAAGCTGAAACCTTCAAGGATTCAGGTCCTTTTAGTGAGTCTGTGCTTGCTTCATCAATCACATTTCTATTGGCTGTAACATTATCTGCATCTGATTTTCCAAATTTCAACCACCCTGTTACCCAGCTAAATAAACCCTTATCCATTTTGGAAATACCATCTCCTTTCTCAGCTTTGTCCACGGAAACAGATACAGATCTATCACATGGTTCTGAATTTGATGTATCCCTTTCTAATGATCTCATATCATCCACATGCTTTAACTTTTTAGAGCGGTCATCATGAGATGAAGTTGATGCACTGCCTGTTGTCACACTGTCAGATCCGTCTGTGCTGCCATTTCGACAAGATTTTTTATAGACTCTCTTCAAAAGTCTCCGATGCTCATTAGCATTATGCTCTTGCTGAGGAGATTGGGCATCACCAACCACTACAGTGGAAGTACTTTCAAGATGGGAAACTTCAGACTTGGCACTCTCAGGGCCTTTCCACAATAGCCAGATCCTTTTGAATAGCCCTTCCTTGTTAACATTGTCTTCCACCCCTGAGGAAGAGGGAATTCCAGAGGCAGTCGTAGGATCAACTTCCTTGTGGTCCTCTGGTGATTCTATCTGTGCATTCAAGTTGGCAGCTGGGTGCTCCTTTTGATCCTCAGGTAACACATCTGATCGGGAAGATAAGACAGCAAATGTAGGTGGATTCTCGCTTGCAGTCTGCAGCTTCTTGGCAATATTTTGAGAAGAATTTTCGGTCTTAGCATTCTTTTCAGAAAAAGAAGTCGACACAGGGAGTGGAGGTGGCTTGTCATTGTGTATTGCTCGATTCAAGTTATTGTCCCCGACATTACTTTCAGTTGAACTCTCAAAATTTTGTTTGTCAGGACCCATCAATTTTCTGTTGGCTGCAACTACACATGGCTGGTTTGCACCAACTGGAGGACTAATAAATTCCACAAAATTTGGCAGCGATTGGAGAAGGCAAGAGAACTTCTTGTGGCCAAAAAAATCATTTCCCAGATAAATATTTTTCTTTTTAAGCTCTAGTCGGAGGTCTGACAGATTCACTCCATTAGGATATGATTTTAGTACCTGCTGGATCGCATTAACCACATATTTGGGGATTGAACCATGCTTGAGATCAGATGGTACTACAACGAGTTCCTCGGGTTCTGTGTCTACAAAGGGATCATCCAGGGCTCCTTTATAGTGACCATACCAAGAACCAGCTAAACCATCAGGTGGGTGGTTAAAACGTTTAGGTGAGAAATCCTCCCCTTTCACTAGAGCTTCCCAGGGCCACATGATTGTTGCTGCACTACAGAGTACACTGGTGGTAGCAGTACCAGGAGAAGCAAGCAGTATGTTATAGTTGCTCATTCGCAGGCGATGCAAAATGTTTGCAAAGTCTTTATCCCCAGATATAAGGAAAAAATGGGCTGGTGGGGGATTCTGTGCGATCCAATAGACAAGATCAGCCATAAATGACCGATCAGAACTATTCTTTCCACCTACATCACGGCAATAGCATTATTAGCAGAACAAGAAGAAACCAAAATACATCATAAGAAAATGAATGCACGAAAAAAATAATGGAGGTGACAGAATGCTAAGTTTTCACTGTTAACATAAGTAGTGCTAATGAGAAGCGCTAATGCTGCTAATTCACCATTTTTAGGAACAAACATCCAAGCACATTCAACTGTCATCTACGGCAGTGAGACCGTCCAACTAACCACCTGATATTGGAGTCACCGAAAGTGTATTAAACTCGACAACACTGCTCGGGCACTACCTAATAATTTACCCATCAAAAACAACAAGAACCACATAACTTAACTACATCAGGAATTAAAAAAGAAAATATTCATAGAGATCTTTTTCCCCAATATCCATGATGAAAATGAAATGGTCCTGATCATCTAGCAATTTGAAGCTAATTGACACCAAAATCAAGTAAACATTAACCAAATAGATTTATTTTATTTTGTGCTTCACTAGAAAAATTAGCCGACAAATCTGAGCCCATGACAAAAAAAAATGTGTAGCCTTTGTAAGGCTAAACAGAAGGAGAGCATAGCTCTTGTACTCCGCATCATTCATCCCTATGAGCTACCCATGATCCATTTCTACACAAAAAGGAATGATCAATTGCTCATTAACCCTCTAATAATATGGAAACTCATATCAATCACTCCTCCAGCAACGCATAATCCAGAGAAATACGCACTAGGGCGCATCACTCGTAGCAAAGGCGACAATACCATTTCCTAATTCATGATTACATCTCTAGAGACGAAGAACAACTCAAAGAGGATACGTGTCAAAAATCAGAACCGCAGGGGGGGATCGAAGTGGGGAAAGGAGAGCGGACGCAACTGTTGGGGACGTGGGAGATGGAGACGCCGGTGGCGACGAGGTCCTCCTGGGACGGCCGGGCGAGCTGGACGACGTCCCCGAAGGCGGTGATGGAGAGCGGGCCGCGGATGCCGGCGGCGCGGAGCGCGGCGGTGACGCGCGGGGCGACGCGGCCGGGGTTGACGCCGTTGGGGAGGTTGCAGTTCTCGAAGTCCCACCACACGGACACCTTCACCGCCTTGCTCTCCTCCTCCTCCTGCTGCTGCTGCTGGTAGGGTCCCCGCCGCCCCACGCCGCCTGCCCCGGCGGCGGCCGAGCTGAGGAGGCGGCTGCTGCTGGGGCCGCAGTGGCGGCGGACGGGGATGCGGCGGAGGAGCACGAGCTGGGACATGGCCGCTGCGGGTGGTGGGTGGGGTTTGGATCGGCGGGGGCCGGGGTCTCTCGCCGGCGGCGCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0117200.1 | 12 | 3182050 | C | T |
| Osa12LNT0117200.1 | 12 | 3182615 | T | C |
| Osa12LNT0117200.1 | 12 | 3183033 | C | T |
| Osa12LNT0117200.1 | 12 | 3183584 | C | T |
| Osa12LNT0117200.1 | 12 | 3183914 | T | C |
| Osa12LNT0117200.1 | 12 | 3184124 | T | C |
| Osa12LNT0117200.1 | 12 | 3183875 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0117200.1 | osa-miR5535 | Cleavage | 5.0 | 17.438 | 1 | 22 |
| Osa12LNT0117200.1 | osa-miR5543 | Cleavage | 5.0 | 15.482 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR5806 | Cleavage | 5.0 | 15.849 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR5814 | Translation | 3.0 | 13.742 | 1 | 24 |
| Osa12LNT0117200.1 | osa-miR5815 | Translation | 4.0 | 10.788 | 1 | 24 |
| Osa12LNT0117200.1 | osa-miR5830 | Translation | 5.0 | 11.879 | 1 | 24 |
| Osa12LNT0117200.1 | osa-miR5512b | Cleavage | 5.0 | 7.54 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR394 | Cleavage | 2.5 | 9.242 | 1 | 20 |
| Osa12LNT0117200.1 | osa-miR159c | Translation | 5.0 | 23.325 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR159d | Translation | 5.0 | 23.325 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR159e | Translation | 5.0 | 23.325 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR168a-5p | Cleavage | 5.0 | 19.931 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR166g-5p | Cleavage | 5.0 | 22.527 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR417 | Cleavage | 4.5 | 17.444 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR426 | Cleavage | 4.0 | 10.306 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR443 | Translation | 5.0 | 10.297 | 1 | 22 |
| Osa12LNT0117200.1 | osa-miR528-5p | Translation | 4.5 | 14.202 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR1423-3p | Cleavage | 5.0 | 15.137 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR1425-3p | Translation | 5.0 | 23.63 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR1429-3p | Cleavage | 5.0 | 17.761 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR169r-3p | Translation | 4.5 | 19.81 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR169r-3p | Cleavage | 5.0 | 19.199 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR1428e-5p | Translation | 5.0 | 15.097 | 1 | 22 |
| Osa12LNT0117200.1 | osa-miR1428e-3p | Cleavage | 4.5 | 24.214 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR1428f-5p | Translation | 5.0 | 15.097 | 1 | 22 |
| Osa12LNT0117200.1 | osa-miR1428g-5p | Translation | 5.0 | 15.097 | 1 | 22 |
| Osa12LNT0117200.1 | osa-miR2093-5p | Cleavage | 4.0 | 17.434 | 1 | 20 |
| Osa12LNT0117200.1 | osa-miR2120 | Translation | 5.0 | 17.072 | 1 | 24 |
| Osa12LNT0117200.1 | osa-miR5504 | Cleavage | 5.0 | 22.233 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR5509 | Translation | 5.0 | 14.712 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR5512a | Cleavage | 5.0 | 7.54 | 1 | 21 |
| Osa12LNT0117200.1 | osa-miR5523 | Translation | 4.0 | 10.73 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0117200.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0117200.1 | 12 | pf12 | Physiological trait | Sterility | RM19 | RM247 |
| Osa12LNT0117200.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0117200.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0117200.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0117200.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117200.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117200.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)