© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0117500.1
ACAGGAACTATATGGTTGAAATGAAATGAAGAAATCAGGACTATTTATACAATCAAATCTAACAGGCTGGAAAAATCGTTACTGCTAGGAACTTTACAGTGCTACCAATCTTGGTGTCGAATTGCGGTGAAAACTTTCCGCTAGGGTAATCTTTCTTGCTTGGTCAGTAGTGCACTATTGGTTTGATAAGGGCCAAAAGTGCAAAGAGGAAAACCCAGTCATCGAAAAAGTTCAGGGAAGGACCACATGATAAACTTGGCGTAGATGTCAGTCTCCAGGAACTCTATGTGCGCTGCTCTGCCAATCATGGTGTTTAGGTTCCGTCCTTGCGCGGACTGATCAAAGTTCACATCACAGCGCATGAAGATCCGGGTTTCAGATGTGGGTGCGCGCATCTGATCTAAGCAATTGTTGAGCATTTCTGTAAAGACTTGGCCCTTCCTTGAGTTATCTGATGATGCAGCCGGGCAGAGCTCGATTCTTGCTGAATGATATGGTACATAACCATCCTGTGGTGAAGATAGAAGTATAATATTTTTGAAGTTCTCCAGTGTCTTCAACTTACAAAGTTTATAAAAGAATGTATTCTGGGGGTCTTGATCATCACTGAAAGTGAGTTGATGGATGCACTGTGCTCCCTTGAGCTTTTTTAGAAGCCAGAGGCCAGAGTTGAATAAAGAGTTTGAGCTGTACCAGTAGCCCAAGTGTGGGCCTGATATTGACATGTACGTGTACAGGTTCTTCAAGTATGGTTGTAATGCGGGTTCTGCAAGTGCAGTTCTGATGATAACGTTCCCAATGGAATGGCCAACAAAACTAAGCTTCAATTCTTTGCAGCCTCCGTACTTTGCAAGCTTATCAACTTTCTTTTTCAGGAATGCAACAACTTCCCCAGCAAGCCTACCACCCATTTCTTTAAAATCCCCAGATGTTTTATCTTCGTTAGCCTCAGACATTAAGCACTCAGCTCCAGGATCCAACAGAAGCCATTGATTTCGTACAAGACGTAAATCCAGATGGTGTCCCTGAAACCCATGCACAAAAATGACAGCTCGCAATATCCGTCCTTTTTTACCAGCACTGCTTTTCAGTGCCAAAGAATCTCCTTGTAGTTTAGGTAGTACAATCGTATCCTTTTGTTCTGAAGAATTTGTTGCCAAATCCTTGCTAGAGCCATGTTGCGGAACAACCATGACATGTTGTTCTATAAGAACAACAGGAACACGTGAAGGATCTGCATATATTTGCATATCTTGAACGGACAGCGTGTTGATCTTCATTTGTGCTATACTTTTCCTGTGCAGTTCAGCCCGTGAGGCAGAATTTTGTACAGGATCATCATGGAACTTCCTTGAGCCAGAAACTCTCAGAAGGGAATGACGGTGAGATGACTCATCGTCCGTACTACGTAAATAGCGGTGTGGGATCTCAATTTTTGAGTGAACAGTCCATATTGACCATTCTGATTTCCGGTCAAGAGCCCAAATATCACGCAAGTAGTCCAATATCTTGGTTTTATTTATCCTATGAAATTTCAAGAAAGCATTCCATAGAAGTGAAAGTTGGCTGCTCACAGTTAGAAACAATTCTAACAACTCTTCCTTAGGAAGTGTATATAGCATAGCATCGTTGGCACCATCAACCGCACTGTTGGGTTTCTCCAGAAAGTCATGTAAAATGCCAGCCAAGTGCCCAACACCCTTGGTAGTTGCCGGGAAAACTTTATTTGAATTAGGTAGACCTGATTTTGCAGGCTGAACTGCCTCATATTTACCAAGACTTAAGTCAGCAACATCTAAATCTTCTACTGTTTTACCAATAGCATCACTGATTTTCTTTAGTTCTTCGAGTAGCATTTCCCTAGAGGTTAATAATGCCTTCACAATGTGATGCGATGTTGGTCCTAAACCTTGGTCTGGTATCTTCAATGATGATTTAGTTGCACCAGCTTTGAGGTACACGATATGTAAAGTCAGATCAACAAGCACGGAGTGGAATGCGTCAAAGTGAACTGGACAATATGAGTGTGAACCAAGGAGTGCTCGACGTGGGACTCTAAATTCATGAACAGCAGCCGAAGAAGTGGCACTAGAAGCTTGAATATCAGACCCATTCTCCAGCGTTGGGGCATATATCAGCTCAAATTTCAATATAACAGATGAAGCTGCTGGGCCCTCTTCTTCACTGTTGAATATGTTAAAAGACACCATAACTGATAGATAAATGTCTTGTCTAGCATATTTGATTCGAAATGGCTGCGTGTAGAAGCTGTTATCGGCATCATCTATTTTCCAAATGCCCAATGCATCGTCCGCACCAACATCAGAAGCTTCATATTGCACGACCCTTGCAGGTGAAGCTGGCGTCTTGGAACCACCTTCCTCCCACGTTGCACTAATCTTCATTTGGTACCACCCTTGCTGGAACAGATCGAGGTTGTGGAAGCGGTGGATGTAAATGGCCACCTCGTGCACCGTCTCCATCACGTCCGGCGAACGGAAGGGGAGCCCGCTCTTTCCCTCCGCTCCGGCGGCGGCGGCGGCGGAGGCGTTGGCGTTGTGCACCCGCCTCAAAGCCGGCGAGACCCTCCTGACCGCCCCGCGCGGGCTGTCCTCGACGCCGCCGCCGACGAGGCACCTCATGCGGCCGAACATGGCGCGACGTCCCCGCGCCGCCTCGCCCGCCCCGATCCGCGCATCCCTGCCTCGATCCCCTCTCGCCTCTCGCCTCTTCCTCCAACTCTAGTCTCTAGAATCTCCAAACCCCCTACTCCAGACGACGGCGGCGACGGCGGCGGCGGCGGCTAGATGCCAACGCGTAGACCCTTCGCTTCAGCGGCGGAGGAGTGGCCCCCACTCCTCAGTGGGGTTGGCAAAATTCGCAGATCGGGAGGCGACGGCTGCGGCTGCGGCTGCGGCGGCGGCCAGTGGAAGCCCAAGCCAGAGGCGGCAGGAGCAGGCCACGCGGAGGCTGTCACGTGGGGCCCAGCTCACCGGCGGCGGCGGCGGCGGCGGTCGGGATCGGAGGCGGCGGAGTTGGGAGGGAAGCGCGCGGTGGCCGGCGGTGGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0117500.1 | 12 | 3297551 | A | G |
| Osa12LNT0117500.1 | 12 | 3298027 | T | C |
| Osa12LNT0117500.1 | 12 | 3298468 | T | C |
| Osa12LNT0117500.1 | 12 | 3301645 | T | C |
| Osa12LNT0117500.1 | 12 | 3300554 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0117500.1 | osa-miR5540 | Cleavage | 4.0 | 14.907 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR5804 | Translation | 4.5 | 16.282 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR5179 | Translation | 5.0 | 22.78 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR1440b | Cleavage | 5.0 | 9.841 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR164a | Translation | 4.5 | 17.984 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR164b | Translation | 4.5 | 17.984 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR164c | Translation | 5.0 | 17.984 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR171c-5p | Cleavage | 3.5 | 20.701 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR171c-5p | Translation | 5.0 | 14.808 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR164f | Translation | 4.5 | 17.984 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR413 | Cleavage | 4.0 | 15.164 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR2871a-3p | Cleavage | 5.0 | 17.711 | 1 | 21 |
| Osa12LNT0117500.1 | osa-miR2871b | Cleavage | 5.0 | 17.711 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0117500.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0117500.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0117500.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0117500.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0117500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117500.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0117500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)