© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0117600.1
ATGCAATTGCAGCAGTCAGGAGTCAGGTAACTCGAGATAGCGTACATTATTCTTGCAACCTGAAAGGTGCACCAAGATATAGAGTGCGACATAGACATGGTTACTCTCAGAGTAACAAACAAAGGAATGCTTGCACCACACAGCCACAATCCATAAATACCATTCTGTTCGAAATACTTGAATTAGAGTACATAAGAAAAACCCAACACCACGTCAATGATTGAGTCTAGAAAGAAGGAAAAAGATCATCATGCGGATGATTTCTGAGTCAGTTCCTTCTTGGAACAATAAAACAGCCAAAACACACACGGCCACTTCGTCACTGCACAGCAGAGTAGCACACACAGTGGAAACAAACACCATATCGTGTTACATTTCCTATCTGTTGTCAGATATATATATGCTCCTATTCTTCAACTCGACGTTGAACCTAAATGCTTACCAAGAACAGCAATGTACCATCGGTTGCTGCCTCAGTGGCCCTCAGGCCTTCTGCCAATCGGCTGCAGCGGTCGCCTTGATGAGTTCTTCGCGACAGAGCGATCAGGGTTCGGCTTCACAGGCCGGTCTGTTTTGATGGCAAGCGTGTTCTCCCTGTTCCTGAGAAGGGCAATTGCAGATTCACTCAGGTTGTCGACTTGCTTCGTGCTAGGGGCGTTCATAGCAATGTGGCTTGGTTTAACAGTGCTGGAAATTTTGAAGCTCAGAAGCTTGGTGCTGATTTCATCTATGCGCCTTCGCCCGCTAGTTTGGCACAAAACTGCTGATCTTGGAACGCTGTCATCCTGATGAATGGCACGCTCTTCAGGAGATTTAGGTGCAGATATATCTTCTGGAACTGGAAGCGACTTTCCAGGGCAAGATTCGGTATGAACACTGATGTCTTCCTGACAAATTGCAGATTCCTTGAGAGATACGGGAGCAGATACGTCATTTGGAAGCTCCTGCTCATGTTGATTATTACTCGCCACAGGTTCAGTACTAAACATGTCAGCAGTGTCTTCATCACAGCTATCGTTGTGTCCTCCAACGCTCACCAGGTTAGGGTTATTATGCTGCCCGAATTTAAATACCAACATTTCTGCAGGAGACACCAGCGTAGTTTCCTGTTCGGCTCTTTCAGTTGGTGAAGGTTCAAACATGTCACCTACTGATCCTGAAACGCTGTCATCCTGGTAATCTTCAGGAGATTTGGGTCCAGGCATATCTTCTAGAATCGCCTGCCCATTGCATGAATCCATACAGGCACTGCAAGGTTCTACTAGAGATTTTGGAGCAGAAAGGTCATTGAGAAGCTCCTGCTCATGGTAACTGTCATCCACAGATCTGTTATCAAAAATGTTCCCAGTGTCTTTACCACCGCTAAGGTTGTGCTCTCCATCCAGCTTAGAGTTAAGCTGCACGGCTGTAAACACTGACAATTTTGCATCTGGCAACAGAGTAATTCCACCTTCTGATCCCTTAGTTGATGCAGCTCCACTCAAGTCAAATGTTGGAATGCATGGCGTCACTTGATCTGCCTTGTGCTCGTTTTCTTCTTTACAGTCCACTTGACACCTCTGCTCATTTGTTTCACAAGATCCTACAACACTCTCGCCCTCAGAAAAGGCAGATTCTTCACGAGCCTTGGTAGCAGATTGGTCATTTGGAAGTTCCATTTCCTGGCAAGAATCTATCTGACCATCTGCAGGAAAACGGAATATACTATACCTCATAAATTCAGTATCTGAAGAGTCCTCGGTGTCTTTAAAGCCGCTAAGGTCGTGCTCTGCAAGTTCATCACATCCTGGCTGAGGGTTAAGCTTTTCATCTAGCAATTCTGACGTTTCTGCAGCTTCTAGCAACATTGTTTCATTTTCTGAAAATTTAATTGATACAGCTTCAGAAAAGGGACTTGAAGGGATGCCTGGGAGGATTTGATCATTGCGTTCACTGCATAGCACTTCATGATCATGATGGAACACATCTGGTAATTCCAACTGTGAAGGGTTAGAACTTGGATGTGCATCATCAAAAATTTGGCTGCTTCGAGGATCGCAAATCTGAGGTCTACTAAAAGGAGAAGCATGTGTAGAAAGTTCACTGCCATGTGATTCCCTGACGGGGGTATCAATATCTGAAGACATGACCTCTATTTTCTCTTCCTTCTCACAAACCAACTCGGAAGAAATAATCTCCCTTTCTGTCTGATTCACATCATCTGCTAAATCTAACTGGATAGGCGCAACCCATCTTTTTTTGTGGCTGGCCTCCGAAAACTCTTCTTGCTCATTAACTTGCTGGCATGACGAAACACAACTGCCGATCTCTTTGACGATCCCTAAATTTTCATGGGAACCTTCGCATCGAACAGGTTCTGCAGAAACAGGTTTTTCAACTCGGCATTTACCATGTGAACTATTTGATTCATCCACTTTGTTTTCAGCACATGGAAAGCCAGCATTGTCCTGTTGTCTGGACCCATCCATGTTTTCCTCTGAGAACAGCGACTGTAGACCAAAAGGCGAGTGCTTGGAATTTGGTGTTTCAGCACCATTCTTCAGCGAAAACTCCAATAAAGTTCCTTGAAGTTTACAATCTGGAGTTGCTAAATTGATGGCTGGCTTCTCAATTATACCCTCGATTCTAAAAACACTGTTCCCTAAGTACATATCAGATGCTTCGAGAGATTTGTCCACTGGAATGTCATTCAAACCCTCATGTTGCTGGTAATGATCCATAGGACAATCTTGTGGTAAACTATGGTCACATGGATTTCCTTTATCAACAACATTCACAGTCCCTAACTCCAAAATGTTAGTACTTTTTTCAGCACAGCTAATGCCAGATTGGCCAACTTGTGTGCTCTCTAGCTCAGAGTTATGCTGGTCATCTTGCAAATTCAATGTTTCATTAGCAGGGAGCAATGTCAATCCACTTTCTAAACCATTAGCAGTGGCAGGTACAGAAATATCAATTGTACTGACTCCTGAAGGAACTTGGTCTTCCATGCGCTTATTGCATTTCTCATTGGGGCCCAGATGCACTCCCATATTGAAAAACAATGTTGGTTCATCCAAGCAATCAGTTGATTCTAGCTGGGATATGTTAGAACTGACATGTACATCATTGTCATTGGCAGGGACTATCACTGAGCTGCTCAGAAGAGCATCACTATTACCCTTAGCATCCTTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0117600.1 | 12 | 3403669 | A | G |
| Osa12LNT0117600.1 | 12 | 3404047 | T | C |
| Osa12LNT0117600.1 | 12 | 3404946 | A | T |
| Osa12LNT0117600.1 | 12 | 3405087 | T | G |
| Osa12LNT0117600.1 | 12 | 3406955 | A | G |
| Osa12LNT0117600.1 | 12 | 3405457 | A | T |
| Osa12LNT0117600.1 | 12 | 3403994 | C | T |
| Osa12LNT0117600.1 | 12 | 3405455 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0117600.1 | osa-miR5829 | Cleavage | 3.5 | 22.202 | 1 | 24 |
| Osa12LNT0117600.1 | osa-miR818f | Cleavage | 3.5 | 20.87 | 1 | 21 |
| Osa12LNT0117600.1 | osa-miR160f-5p | Translation | 4.0 | 17.462 | 1 | 21 |
| Osa12LNT0117600.1 | osa-miR529b | Translation | 4.0 | 14.627 | 1 | 21 |
| Osa12LNT0117600.1 | osa-miR1431 | Translation | 4.0 | 17.858 | 1 | 21 |
| Osa12LNT0117600.1 | osa-miR2090 | Cleavage | 3.5 | 7.678 | 1 | 22 |
| Osa12LNT0117600.1 | osa-miR5150-5p | Translation | 3.5 | 17.462 | 1 | 24 |
| Osa12LNT0117600.1 | osa-miR5150-3p | Translation | 4.5 | 11.77 | 1 | 24 |
| Osa12LNT0117600.1 | osa-miR5160 | Cleavage | 5.0 | 20.393 | 1 | 22 |
| Osa12LNT0117600.1 | osa-miR5487 | Cleavage | 4.0 | 17.625 | 1 | 21 |
| Osa12LNT0117600.1 | osa-miR5508 | Cleavage | 4.5 | 17.881 | 1 | 21 |
| Osa12LNT0117600.1 | osa-miR816 | Translation | 4.5 | 19.367 | 1 | 20 |
| Osa12LNT0117600.1 | osa-miR5500 | Translation | 5.0 | 14.706 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0117600.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0117600.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0117600.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0117600.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0117600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117600.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)