© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0118000.1
AGGAGAGAAGGATCTATTTACTTCTGTCCTTCAAAATGAGTTTACATATCTGTTTATCTGTAAACAAGTACATAAATATGAACTAGGAACATCCTAATGTTTATACATTTCACAGTACTAGTGAAATTTGCTGATATGCGTGCAAATTGAGGAAACAAAAACCAACATAGGCAGATTCTTCAGCCCGGCGTCAGAGAGTTTCAGTGCATCTGATGCAACTTTGGTTGCTCTCCAATGTGTCATTTCTTTGGCATGATGCATAATTAGCTCCAGGAACTGGAAAAAATACAGGTTTGAAAAAATTACCAGTAATTCATGGGGAAATCACACTTTAGCTCGTTTCAGGTAAACCATCACTGCTGCACCGCTGAGAGCGACCACACCAGCCATCAGCCCAACACGAACAGGCGACAACCGACTCCTGCGTGCAGCTGCCAGCTGCTGTGATGGCTTTGTCACCTCTGTGCTGGATTCAGACAGGTCGATATGCAACTTCAGAACCTTCAAACCGGACGATTTGGCATGGAGCACGGCACCAGCAAGATCGGCATCAGTTGTCAGTAGCACCCGGTCACCTTCATCGTCTTCGTACAGGAGTTGCATTATGCCCTCTTCGTCAGTAATACTTAATCTTTGTTTTATAGAAGACGCTAGCTCGTTTAAGCTCTCTGAGCCACAAGTGAATCTATGCACGCGTCCCTTTTGGTCTTGAAGCTTAAAGGCAAACGAATTTCCAATAACAGGGGGGTAAATGCTACTCTTTCCATCTCCAGTTTCTGATGCCAAGAGCAATGATACTTCACTACGGCTATCGCATTCCTCATCAGGAGACTCCAAAGCAAGAGTAGAATCCCAAAACCTCTGCATTACTGTATTTGCCACATCATTTACAGTGTCATTTCCTCCTTCAACCAATTGAATGGCTGCGTGGGTAAGTTGCAGGACATCCAAGCAAGCAGCAATTTGTCCTTCTCGATCAAGAACAGGAATATGCAAGAACTTTCCATCATGCATTATATGTAGAGCATCAAGAATTGTCGTGTCTAATGTAGCAAAATCTGGGTTTACAGTCATCACCTTTTCTACTAGGGTCAATTCAGGAGAAAGATTCTGTGCAACAACACGCATAAGCAAATCCTTTGAGGTGAAGATCCCCTGTAGTGTGTTTCCTGTAGCAACAACCACCGAATTAACTCGAAATTCACGCATTTTCTGTGTTGCTACATACACTGGGTCTGAAGGAGAAACAATTGCTACCTTTGTGCCCTCCGTGACAATGGTTGACAAAGAAGGTTTGAACATCCTCTCTCTTAGAGTTTCTATGAAAGCATAAGGAGCTGAAAAGTTGCCTCCTAATTGACGCTCTACCCCTTCTACAGCAGCTGCTATTGCACTCCCTTGTTCTGCTGCCTTTTCCAGTCTTGATATTGCATCGTAAAGGCATTTAGCAATGTCCAGCATAGCAATAACCTCACCATTTTCCACAACTGGGAGGTGTCTAAATTTACCTTGAACCATCTTCTGCAATGCTTCAATGGCAAGCGTATCAGACATGGCATATGTGGGGTTCCTTGTCATGATCTTGGACATGATGGTTTGCTCCACCCGCAGCCCCTCAGCAACCACCCTTGTAGCTACATCCTTATCAGTGACGATGCCGGAGAGGAGGCCCTGCGCGTCGGTGAGCAGCACGGCGTCGACCCTCCTCGCCGCCATCCTCCTGCACGCCTCCGACACCGTCGTCCCCTCCGGTATCGTCAGCGCCTTGGACAGCCTCAGCTTCCTCACCGTCCTCTCCCCGCTTCAACCAACAGAAGAAACCCCCAAAATCATTCAGCGGCTACGAACCAAAGGAGAGAAGGAACGGAAGGAAGGGTTCGCAGGCTCGGTGTGCTTACGTCAGCTGGCCGGGGGAGGTGGGCTTGGAGGAGGCCTTCCCGTTCCCGTTGGCGGCGGCGGCGGAGGGGTCGTCGGACTTGCGGGAGGACGCCGACGGCGGGCGGCTCCGCGTCCGGCGGCTCGGCGGCGCCGTCGCCGAGGCCGTGCTCATGGTGGCGCTCGTCGCGGGGAGGAGGTTAGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCGGAGAGTTGGGAGAGCAGGTGGAATGGAAATGGGAGCTTCGGCTTCGTTTCTCCTGCGACAGCGCGTGGGTTTTTTGCGCTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0118000.1 | 12 | 3533032 | A | G |
| Osa12LNT0118000.1 | 12 | 3532722 | A | C |
| Osa12LNT0118000.1 | 12 | 3532753 | T | A |
| Osa12LNT0118000.1 | 12 | 3534602 | A | C |
| Osa12LNT0118000.1 | 12 | 3534726 | A | G |
| Osa12LNT0118000.1 | 12 | 3534970 | A | G |
| Osa12LNT0118000.1 | 12 | 3532098 | A | G |
| Osa12LNT0118000.1 | 12 | 3532489 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0118000.1 | osa-miR812r | Cleavage | 3.5 | 15.099 | 1 | 24 |
| Osa12LNT0118000.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 15.37 | 1 | 22 |
| Osa12LNT0118000.1 | osa-miR1877 | Cleavage | 3.0 | 13.335 | 1 | 24 |
| Osa12LNT0118000.1 | osa-miR5076 | Cleavage | 3.5 | 15.789 | 1 | 22 |
| Osa12LNT0118000.1 | osa-miR5515 | Cleavage | 4.5 | 20.624 | 1 | 21 |
| Osa12LNT0118000.1 | osa-miR1870-5p | Translation | 4.5 | 17.936 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0118000.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0118000.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0118000.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0118000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0118000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0118000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0118000.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0118000.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)