© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0119100.1
ATACCACACCATTTTCAGTCTATCATATTAGTCATTTAAATTAGTATCAAATAACAAGTGGGCTAAGCCCATATAGGCCCACCAATCGAACACAGCAACCACCCATATAGCACAAAGGTTACAACCCAATTAGCATCTAACACGACCCGACAAACATCCAATACAACACAAATTTTACAACACAGTTAACAGCCAAATCCAGCCACATTCCAAATACAATCACAGCAACCAAAATTTCACCGGATGTCGCGCGACCAAGATCTTCAAAGTGAGCTTAGCAGCACGATGTCATTGTAGTGGCAGTATTCAGGATCATCAGCACAAACTGCTATTATCTTGTCATCCTTCTCACCCTAATCCATCCATTATCCTCAGTTAAAAAGAAAGTGTTTGGTAAAAAAAAACAGAGTGAAGCAACACATATGTTAGGCAATTTACTCTGTGTTACCAGAGCCTAAATCTCATAATTGTGACTAAAGGGACACTATCATTAAGAATAATTGTTCTTCCTTAAGTAATCTGTGAAATGCATTTGTAATATTTCGTGAGATAAACAATTTTTGTACCATGTAAGCAAAAAAAAAAGGTGATATATGCATCCAGTTTTTCATGTTTGAAACAGCACACTGTGTAAGTCTAATCTATTTTTTTCCCTATTTCCATGGTTAGAAACAAAATCATAAATCATGGACCATGTAGTCAGTACTAAGATTTTAGGAATATATTATTTGGAGCTAAAGCTAAAGCTTTGTATCTACACTGCTTTTAGATACACTACCACTAATAAGCAAAAAAGCTAGTTTTTTTTAGTACCTTTTTTGGTTTTTTATGGATTGGAGTATGACACTACCCTCAATTTTGCATTTTTTTCATAAACTGCAAAAGCCAAAAGGCCAGCTTAAACACAGAAGGTAATATACGACTAAGATGAAACAAACAGGTCAAGTTTACCAGAGAAAAGTTCTCTGTGCAACTTTTTTGTCTAGCTTGTATGAAATAAGGTTCACAAGAGAACCAACCAATTTTGCTAAAAGTGACCACTCTTATTGTAACTGATCTGAATACTGGAGACTAGAGCTCATGGCTGAAACTGAGGACTAACACCAGCAACATATCCGATTGCCCAATCGGATGGTTCATTTTGCAAGATCTGAATCGACCAATCAATAATGAATGAAAGCACTGATTATTTCTTTCCATGATTCGAGTAAGATGCCCGATTCTTCATTAACCCAGGTGCATGTCTAATCCCCAATACTCCCCATGCCTAAACCCTAGTTTGTTCCAATCAAACAAGAGCTGCTTCCGACCCAAATCACCCCATCCGTCCCCCATGCCTAAACCCTAGTTTGTTCCAATCAAACAAGAGCTGCTTCTGACCCAAATCACCCCATCCGTCCCTCAAGGAATAAAATCATAAATCCATCAACAAGTAGCACAAAAGCTGCAGCAGGAGAGGGGGAAAAAAAGAAAGAGTGGTAGAATTAGAACAGAGGCGGGCGATCTGGTGGCCGCCGAGGTCGAAGGCCTTGAACTTGTTCTTGGCGACGCTCAGCTCTACGACGTCGGGTACTGCGTCGGCTGGTGCTGCGCGAGCCGCTCGTCCTTGAGCATGTGTCGGGCTCGGGGACGGCGGCTTGAGGTGGCGGCATCTTGAGGTGGACGGCGGCTTGAGGTCGTCGGTGTCTTGAGGTGTCGGCGGGCTCCGAAATCCGCATCTGCACACGCGTCAACTCCCCGACGGTCGCCGGCCACCGCGGCGGCGCCGACTTCGCCCCACCGCAGCCGCCGCTCCCAGGGCTTCCACCCTTGGAGCGACGGGGAGGAGGTGTTCGTGGCGGAGAGGGGGGCGCCAAGGTCGGGGAACGGGGAGGGTAGGCCGCCGCCGCCGGTGCTGAACGACGCGGCGGCGGCAGATGAGCTATTGGAGGAGTGGATGGTGGTGGCGGAAGGGGACGATGGCGGCGGCGGAGTGGACGGTGGCGGCGTCGCACGAACGGTGTCGGTGGGGAGTGGATGGTGGCGGCAGCGGCGGTGGCAGAGTGGATGGAGTGGCAGCGGCGGTGGCAGTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0119100.1 | 12 | 4635424 | G | A |
| Osa12LNT0119100.1 | 12 | 4637523 | C | G |
| Osa12LNT0119100.1 | 12 | 4637835 | T | G |
| Osa12LNT0119100.1 | 12 | 4637992 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0119100.1 | osa-miR5541 | Cleavage | 5.0 | 13.651 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR6255 | Cleavage | 4.0 | 13.974 | 1 | 22 |
| Osa12LNT0119100.1 | osa-miR159a.1 | Translation | 4.5 | 9.672 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR159a.1 | Translation | 5.0 | 11.24 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR159b | Translation | 4.5 | 9.672 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR159b | Translation | 5.0 | 11.24 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR319a-5p | Translation | 4.5 | 19.675 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR319a-5p | Translation | 5.0 | 17.014 | 1 | 21 |
| Osa12LNT0119100.1 | osa-miR1861c | Cleavage | 4.5 | 18.501 | 1 | 22 |
| Osa12LNT0119100.1 | osa-miR2099-3p | Translation | 4.0 | 15.699 | 1 | 20 |
| Osa12LNT0119100.1 | osa-miR5508 | Cleavage | 4.5 | 5.908 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0119100.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0119100.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0119100.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0119100.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0119100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0119100.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0119100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0119100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0119100.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)