© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0119200.1
GTCACACAACATAACATTCATAAACCCCCCCAGACATAGACATAGTTTCTCAAACTAATAATCAAGCGATACAGTCATACACTTGATAGTCACACAACATCAAACATTTATGTTGTGCTAAATACAAACCCCATACACTTGGTAGAGTCACGCAACATCAACATTCATGCTGGGCTAAATACAAACCCCAGACATCAGTAACGTCAGATGACCACACAATGAAGTCTCCACCAAACTCTCTCTTCTGATAATGAGAATGAGCTTTTATCCCGTGAGAATTTCTAACCTTGTAAAATGTTTCTGTTTTGTTGCCATTAGACCCTACTCCACATCCGATCAAAGCAACTGCATGAGCATCACTAGTGTTCTCACATGTTGGGGCACAATAATACTGACCATCACTTAAGTAATTAAATAGGAAACCGTGACGAATCCCTGCTACTAATGGGAAGCCTCCTGCCAACAATCTAGTTATATAAAGAACATCCTTAGGGTCAACACGAAAATAACTTTGAATCTTAAGGCGTGGGACTGGAGTTGTTGTAACATCAGAAGCTCCAATCAATATAGCAATCCCATCACTTTTTAGAACTTCCATGACAATTGGACAATTATCATAAGTCTCATATAACTTATCTTGAGGTTCATTTCCTAGTTTAAAACCAGTCCTTTTGTTATATGTCTCAACCATCTCATTTATATCAAATGGAGCAGAAAACACAAATCCCTTTTGTGCTCCTTCCAGTCTACGGGTACAATCAATTACCGCAGTAATTGCATATAGAGTACAATGTGGTTCAAGTTTTTGATCATAGGTCTTAAAATCCAAAGAAATACCATTGAGTGTACATTGAGTTATCTTCCACTCGTAAGCTGCATCGTTCTTCAAACCACAGTCAACACACCCGAATGGAGGCAAGTCTACAAGCATATTCTTGATAGGCTCGTACTCCTTCCTACACCCGGGGCAAATCCAATTCCTGACGTAATCCATGGCCTTCCTCTTATCACGGTACATGGCAGCCCGCTCATCTAGCTCAGAAATCTCCGGAGCAGGCCCGATGACCCAACTACCCATCTGAATCCGGCAGATCGGAGGCGGTGCGTGCCCCGGCAGCGTAGATAGGCGAGCGGCGGCAGATGGATAAACAAGGAGGAGAAACCCTACATAATGGGGGGGATTCCATATCCTTTATAAACGAATTTCCCTTTTTCTTGTTTCCTGCTGGTCTACAGTCTAGAAGCATTCTTCCTCTCTAGCACTGCAGTCCACTATATTTATGGTTTTCCAGGATGCTGCAAAGCACACTTCATTTTCATTCACTTGAACTGGCGTTCAACTTAACTTGTCGGTCATCGCTGTTCATCATTCAAATGCTTGCTCTCTGTTCACTCTCTCCTCTCATTGATCCTCTCTCTTGTGCATTCTCGTCAACAAAATCTTAGCAACTTGTTTCCGGTTAGAGAATAGCTCGGACACTTTTATCAAGTGAAGTCAATGGGTTCAACTGTTCAAGCCTTCCAAACCGCATCTTTCTTTCACAAGTAGTCACCACTGGTCAGGGTCATTAGAAGGATAATTCCAAGGTGCACCTCCAAAAATCAAGCCAGCACCAGGATGATGTGTGGCAAATAAGCTACTCAGCGCAGATTTTGCAGTTTCTATGTCACGTCTGTCAGCACCATAATCCCGGTTTATGTGAATTTCTCTTAGGCATGCTGGCAGGTGATCAATGCCAACAGGTAAGCAAGTGCCGCTGCATTTCTACCATCCCGTTGCATCAAGCCATAGCTCAAGCTTCTGTAACCTGGGCATAGAACAAGCTTTGAAGTCCAGGAATGGCTTATGACACCTGAACAGCAAGTGCTTGAGAGCTCGGAATGCCATGCCCGTACCGGAGAAGATGACTCTTTCTTCTGGGCACAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0119200.1 | 12 | 4815430 | A | G |
| Osa12LNT0119200.1 | 12 | 4815972 | T | G |
| Osa12LNT0119200.1 | 12 | 4816357 | T | C |
| Osa12LNT0119200.1 | 12 | 4816602 | A | G |
| Osa12LNT0119200.1 | 12 | 4816622 | T | C |
| Osa12LNT0119200.1 | 12 | 4816774 | C | T |
| Osa12LNT0119200.1 | 12 | 4816775 | A | G |
| Osa12LNT0119200.1 | 12 | 4816948 | C | T |
| Osa12LNT0119200.1 | 12 | 4817148 | A | G |
| Osa12LNT0119200.1 | 12 | 4817410 | G | A |
| Osa12LNT0119200.1 | 12 | 4817566 | T | C |
| Osa12LNT0119200.1 | 12 | 4816394 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0119200.1 | osa-miR5532 | Cleavage | 4.5 | 9.699 | 1 | 22 |
| Osa12LNT0119200.1 | osa-miR812p | Translation | 4.5 | 12.132 | 1 | 24 |
| Osa12LNT0119200.1 | osa-miR156a | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156b-5p | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156c-5p | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156d | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156e | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156f-5p | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156g-5p | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156h-5p | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156i | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156j-5p | Cleavage | 3.5 | 4.919 | 1 | 20 |
| Osa12LNT0119200.1 | osa-miR156l-5p | Cleavage | 4.5 | 4.919 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR171i-5p | Translation | 4.5 | 15.17 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR415 | Cleavage | 5.0 | 15.544 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR528-5p | Cleavage | 4.0 | 16.442 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR1856 | Cleavage | 4.5 | 17.252 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR1320-5p | Cleavage | 4.5 | 15.953 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR2871a-3p | Translation | 4.5 | 12.728 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR2871b | Translation | 4.5 | 12.728 | 1 | 21 |
| Osa12LNT0119200.1 | osa-miR5519 | Translation | 4.5 | 12.942 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0119200.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0119200.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0119200.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0119200.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0119200.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0119200.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0119200.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0119200.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0119200.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)