© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0120000.1
GAGGGATGGAAGGGATTCAAGCCCACCCAAGGATGACAGATTCCCACATTTCTGTATGATGATGATCTGCAGCGAGGTGAAATTCCTACTGAAAACTTCTGAGGGGGGGAGGGATACCAGGTTCGAGCAGTTATTCAGATTCAATACGGAGAGATTGATGAGTTGTTGCTCTTGCAGTGACACAACCACTATACGCTCATAGTCACCACATGATCTGATATATAGATCTTTAAGTGATGGTGGCAGGAACATTTCCCCAGCACCTCTCGGTGCCCTCAATTCGGGACAGCCTCCTATTCTTAGAGATTTGAGCATATTCATTGCTTCAAATGATATTGATGCAGACTCCAGATGTATACAGTTGTCGATGTGCAGGTTTCTTAGAGCTACCATGTGCTGCTTCTGCTCAAGAAAGCTGTCTTCCAGGGAACTTAAGCATGGACAATCATTGATAACAACCTCCTGCAATTGGGCTAAAATTGTTTCATTGCTCTTGCTGCATAGCTTGCCCATCCTTGGAAGTTTAGTCCAATTAACTTCTATTATTTGAAATGATACCAGACTAGGAGGTAGAAGAGGTAATTCCTGCAGCTCTGGGCATTGTTCTATTTCCAGACTAAGAAGATTTGGAGGTAGCAACAGCTCCATGGAACTACTACTAGACATATGAGAATGCCGGCCAATCTGCTGTAGCTTTGGAAGATTTCTCAACAAAAGATATCTGAGCAGTGTTAGCTCTCCAAGTGACGGTAGTTGTTCCCAGTTTATACAACTTTCTAATTTGATTGATACCAGTTTTCTGACAGAAAGGTTCTCAATCCAAAATGGAACGACGCACCCTTCATAGCCACAAATTCTTAGATTCCTGATATTAGTGTGTGGCTCAAGGTGTTGAAGAACCAACTCGTCTACAGTGTCATGTTCACCAGTATGTGGTGACCACTCAAGAGACAGAGAATGGAGATGCTGTTTTTCATTCAGTTTAGCATTGATGGCCTCTTCGTGGTTCTCAATATTCTCAACACCTTGAATATTTAGCTCACGAAGACAATGTAAGTTCTTGATTGAGCTCACTTTGTTGCCCCCACTTTCTTTCACATGGTATATACTCAATCTCCGAATTGATTCAAGTCTGCTTATAGGCAGCATACCAAACAATTTGTACGTATCCTGCCCATAGGCTACATGCCGCAAACGATAAAGGTTCAACATAAATCTCTCTTGTTTTGCTACACACAGCAAGCTCCTACGACAAGGAAATACCGTCGTCGGGCTAGAAATCGAAAGTAGTACCAACAAGTGATAAAGTTTGGCAATATGATAAATCCCTTTTGATGAGATGCCAAATATGTCGATGTAGCGAAGGTGTTTCAACTTTCCAAACTTGCTGGAAAAATCAAATCTTATTCTCAACCTTGAATGAAATAGCCGTAATGATTTTGTGCTTTCAATGATTTTTTGAAGTGTATTCTTTGTATCCTTATCAAGCTTAGATTCAGTAACAATGATGATACTGCGAAGATTCTTAAATTGGGATATTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0120000.1 | 12 | 5747710 | A | G |
| Osa12LNT0120000.1 | 12 | 5747721 | T | A |
| Osa12LNT0120000.1 | 12 | 5748444 | A | C |
| Osa12LNT0120000.1 | 12 | 5748225 | G | A |
| Osa12LNT0120000.1 | 12 | 5748252 | G | C |
| Osa12LNT0120000.1 | 12 | 5748788 | G | A |
| Osa12LNT0120000.1 | 12 | 5749037 | C | T |
| Osa12LNT0120000.1 | 12 | 5749160 | C | T |
| Osa12LNT0120000.1 | 12 | 5749218 | T | C |
| Osa12LNT0120000.1 | 12 | 5749236 | A | G |
| Osa12LNT0120000.1 | 12 | 5749351 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0120000.1 | osa-miR5538 | Translation | 5.0 | 13.576 | 1 | 22 |
| Osa12LNT0120000.1 | osa-miR166a-3p | Translation | 5.0 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR166b-3p | Translation | 5.0 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR166d-3p | Translation | 5.0 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR166e-3p | Translation | 4.5 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR166f | Translation | 5.0 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR3979-5p | Cleavage | 4.0 | 19.228 | 1 | 20 |
| Osa12LNT0120000.1 | osa-miR5339 | Cleavage | 5.0 | 11.855 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR166j-3p | Translation | 5.0 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR5501 | Translation | 4.5 | 21.353 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR166c-3p | Translation | 5.0 | 18.569 | 1 | 21 |
| Osa12LNT0120000.1 | osa-miR5157a-3p | Cleavage | 3.5 | 21.618 | 1 | 24 |
| Osa12LNT0120000.1 | osa-miR5157b-3p | Cleavage | 3.5 | 21.618 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0120000.1 | 12 | qCTS12 | Resistance or Tolerance | Cold tolerance | RM5746 | RM3103 |
| Osa12LNT0120000.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0120000.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0120000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0120000.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0120000.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0120000.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0120000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0120000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0120000.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)