© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0121300.1
ACGCATCCCCACATCGCCGCGCCCGCTCCACTCTTCCACCCCCGGCGACCCCATCGCCGCCAGCGATCCCGCGTTGATCTCCTCCGCATCCCCCTTCTGTGGCCAGATCCAGATCGATGGCGAGCCCCAGCGACCAACGCCGGCGCCCTCTGCTCCGGCAACCTCCTCCTCGGCCATCTCCTCCCCGACTCCCGGTCTCCATTGCAGCGCTCGCTTCCTCCGCATCCAACCTCGCGCCGCCCCCCATCGCCGCACGACGCCTCGATCGACGGCGCCCCCCATCGTCCCCGTCGACCGTCGCTGCCCACGGCGCCTCCAAACCGTCGCCGCATGCCCAGCTGATCCCCGTCGCCCACGACCACGCAGCCCACCTATCCTCCGTCGCCACCTCCACGAGTCACCTCACGTCGATATCCTCCGCGCCACCAGCGATCCCGCGTCGATCTCCTCCACGTCCCCCTTCCGTTGGCCGCCGTCGTCTCCACGCATGCTCACACTACTCCGCGGTGCTCGTCGGCGCAGCTCAGGACTACACCTCGTTGCCGATCGATCCCGCCCTCTTCCACTGGAGCCCCCTCGCTAACCTGATGCAACGACAAAAATGCAAGCTGCAGGCCTGTAGGGCACTACACAACATTGTGATGAGTGAGCCATTGCCACTATGCTGGTCATGGAGCAGCAAAGCAGAGACTATATGTTAAGGACATTGGCCCTTGTAGTCCTGGAAATTATTCTGGAGGTGGCTGTGACCTGAGCATACATTGGTGACTTAAACCTTGGTAGAACCCAGCACAAATAGGAGGCGGCATCTTAATACAATGAAAAATGATGGGAACTCCATGCCAGATTTGTCAACACAATCAAGTCTATTCTTTCGAAGAGGCACACTGGCCAATGTAACAAACTTAACTGCTGCCGAGGTTAGAAGAAAGCATGACAGGGAGAGGTACTTTCATGAAGGTAAGTAGCAGAAATTCGGTGCCCATATCCTGTTGTTTCCAGTTGACGTCTTCAGATCCTTCTCAACATAATCGAAGGTAAACAAACTATTTTCCCTGTTTTCCTTGTGTGAATGATATGAAAAAATATTTTGCACTTGTTCAGTAATTTGTGCAAACTGGAAATACTGAAAATACTAAGGACGAAGAATAATATTCGAAGCCAATCCAAAAGCATTGCAAATGTCGAAGGACAAAAACTCCCAGTAATGCTTGCATGAAAATAGATTAAAACAGGCTCTCTGCGAACAAAATACATTTCTTAATATTGCTCATTTGATAACGAGGCTGGAAACCTAAGCATGTGAACACTATAAAGATGTGAAAATTATAAATATGTGACATACTTATTATTAGTTCTATATTAATGTTTTTGTTACATCCGATTTACACTCAATGATTATTTAACATAATTTCACTTGGTGTGATTTTTCTCCGTTGCAACGCATGGGCACCCTACTAGTATAAGGGATTTTGAGTTTTTGTTTGAATTGTTTGACCACTCGTCTTATTCAAAAAATTTGTGTAAATATAAAAAATGAAAAGTTGTGCTTAAAGTACTTTGAATAATAAAGTAAATCACAAAAAAATAAATAATAATTCCAAAATTTTTTGAATAAGATGAGTGGTCAAACAGTGCAAGCAAAAACTCAAAATCCCTTATATTATGGGACGAATGGAGTAAAATGGTTCTTTTAGAGTACCTCCTGGATTGTGCACAACCATGTGGAGTCGTAGGTGATGGTTGCAGCTCAGTCAATACCCGACAGCATAGTGCAGATGAAAATTCTTCTTAAATATACAGTTGCAGAGGACCTCAAACTTGTTTTAATGATGTTCAATGGTGTCTAGGCAAAATTGCTACCAGGTAAAGCTTCTTTATGTATTGTTGCTCTGACCATCATTTTTCTGCCAACATGATCAGTTATGTATGATATACAGTAAATCTGATTAGCTTTGTAGACTTGTGCAGATCTTTCCTAATTCATATAATTGATTTTTCCTGATTGCATATCACCCTTAATGCTATATTTCGTTACTTATGATTTCATTTAATGTTTGGGAGACTTATGGCTTATCTGTACTTGCTCTACTCAAAATCAAAACCTACGTCAAAGTTACCATGATATAGCAAATTAACTTTTCGTCTAAAGTCTGAACCTGAGCTATTAGATTGGCGTACAGTGTTTTGTTATGTTGTTGTGTGACCAATGCCAATAAACTTGACGTGGACACTCTTCTATGAACTTCATGAAGTCAGCATCCCATGTTGTAGCCTTCGGTGGATCGGTGGTCCAGATTGTCAGGTCTGTAGAGGCACAAATTTATTTGTAACTGGTTGATTTCTACTCGGGTTTGTTTCTCGCTTTTGATATTTGACAAGTATACTTGCAACGATACTAAGAGGAATGTTTAGTCTGCGTCCCTATTGTTGGTTGTGGACTTCTGCAATTATCTTGTTTTTTGAGTTATGTTAAATGCATATGTCCGGTAGGGATTTGAGGATGATATTGGAGTCCATGTAAACTGCAGATGGTAGTTTCCCAGTAAAATTAACTTCTTGCTTTGGTACATCTGATGTGGATTCCTTTTTTTTCTTTGCATAAGCATGCTAACAATCTTTTGCTACAACACTGCAAATCAATTTAACATGTACAATTCTTTCCATCATTGATGAAGCCACACAGAGATGAGCCTTGCCATCCCTTTCTCATGCGCATAGCCTTAATGAACTCCAAGATACAACACATCCATATTGATGGAAATTGGTCAGGGATCTAAACAAAATATTTCTTTGTGGGAACTTGGAAACATTTGATTACATGATCTCTCAATTTCTCATTGCCTTTAGTTATGAAAATATATCAATGTCAGTATTTTTGCATATGTTAGTGGTTTAAGATTTCGTGAATTGATTGCAATCATTATAATATATATCTATTTGTAGACAGAAAGAGAACTTAGCTGGTCAATCCCTCCATTTGACTTTTTTTTAGGGTTGGTTTGATTTGTTCAGAAGGGCTCGAGAGATGGTATCAGGCTATCAGCATCAGATGCTACCATGTTTGTGCAGAAGGCTTGCCAAACACACTCACGACGACATAGTGAATGATAGTATAAGAGGAATTGCATTTGGCGGCATATATGTGACAAGATGGAATGTATTTTTCAACATTCCAACCTCTATGTAAGATCGAATATATGCAATTAACATCTAAATCTAATAAATACGACATCATTTGCAATGTGCACCTATTTGTTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0121300.1 | 12 | 7410832 | A | C |
| Osa12LNT0121300.1 | 12 | 7409544 | G | C |
| Osa12LNT0121300.1 | 12 | 7409592 | A | G |
| Osa12LNT0121300.1 | 12 | 7410213 | T | A |
| Osa12LNT0121300.1 | 12 | 7411179 | C | T |
| Osa12LNT0121300.1 | 12 | 7411442 | T | A |
| Osa12LNT0121300.1 | 12 | 7412188 | C | T |
| Osa12LNT0121300.1 | 12 | 7412318 | G | A |
| Osa12LNT0121300.1 | 12 | 7412509 | A | G |
| Osa12LNT0121300.1 | 12 | 7412535 | A | G |
| Osa12LNT0121300.1 | 12 | 7412573 | C | G |
| Osa12LNT0121300.1 | 12 | 7412846 | G | A |
| Osa12LNT0121300.1 | 12 | 7413181 | T | G |
| Osa12LNT0121300.1 | 12 | 7413217 | C | T |
| Osa12LNT0121300.1 | 12 | 7413232 | T | C |
| Osa12LNT0121300.1 | 12 | 7413388 | C | G |
| Osa12LNT0121300.1 | 12 | 7413695 | G | A |
| Osa12LNT0121300.1 | 12 | 7410677 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0121300.1 | osa-miR5789 | Translation | 5.0 | 18.375 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR6252 | Cleavage | 4.5 | 12.026 | 1 | 23 |
| Osa12LNT0121300.1 | osa-miR6252 | Cleavage | 5.0 | 8.368 | 1 | 23 |
| Osa12LNT0121300.1 | osa-miR156c-3p | Cleavage | 4.0 | 13.047 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR156f-3p | Cleavage | 3.0 | 13.047 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR156g-3p | Cleavage | 4.0 | 13.047 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR156h-3p | Cleavage | 3.0 | 13.047 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR398a | Cleavage | 5.0 | 16.626 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR398b | Cleavage | 4.5 | 16.626 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR156l-3p | Cleavage | 3.0 | 13.047 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR160f-3p | Translation | 3.5 | 9.144 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR528-5p | Translation | 3.0 | 18.55 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR528-5p | Translation | 4.0 | 16.301 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR818a | Cleavage | 4.0 | 14.517 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR818b | Cleavage | 4.0 | 14.517 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR818c | Cleavage | 4.0 | 14.517 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR818d | Cleavage | 4.0 | 14.517 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR818e | Cleavage | 4.0 | 14.517 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR1850.3 | Translation | 5.0 | 13.3 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR2096-3p | Cleavage | 5.0 | 14.866 | 1 | 21 |
| Osa12LNT0121300.1 | osa-miR2920 | Cleavage | 5.0 | 20.966 | 1 | 23 |
| Osa12LNT0121300.1 | osa-miR2921 | Translation | 5.0 | 14.846 | 1 | 24 |
| Osa12LNT0121300.1 | osa-miR2923 | Cleavage | 5.0 | 13.024 | 1 | 22 |
| Osa12LNT0121300.1 | osa-miR5495 | Cleavage | 4.5 | 14.179 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0121300.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0121300.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0121300.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0121300.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0121300.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0121300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121300.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa12LNT0121300.1 | osa-MIR818e | 89.352 | 216 | 4 | 214 | 9.96e-72 | 267 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)