© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0121500.1
AACGGCTGAGATTTTGCTGAATTTACACTTCTGCCTGGTAATAGTGTGACTGAAATTCATGGGAAATCTAGGGAGCTGGTAACACATTGGAGCAAGATGCAAGTTATACAGCATTCTTACATACATGGAAGCACCAAAAATATTACTTTTAACCCAACCCTTGAAATTTCTTCTTCTGTTCTTGCTTCCGAAGAGAGCTGGAAATTACCTGGAGACTATCAGAAAGAGATTGCTTGTGTATGTACAGTAGAGAAGCAAAGCATCACTGATGCTTAGGACACACCCTCACTGGTCACTACTGGTCATCCAGCTTCCAAACCTCATGGAGGAGCCTGTACCTGGCACTGTTTGGGTTCCCAATCTGCTTCAGCTTCGCGAGCGGGTTCGACGAAGCCTTGGAGATGAAGGTCAATGGCGAGCTCAGCTCATCCAGCTCGTCGTCGCTCGTGTTGGACTTGCGGAGGATGGCCGACCCGCTCTTCCTGGGGTCGCCGATCATGCTTAGGATTGCTCCGGATGCCGGGTATGGGTATAGGATGGGTGACGCGCTGCACGGGACCGCTCGGATGCCCTTGGTGTTACCCTCCAAATGATCCTCTGACTCCAGTGCTTCAAGCAAGGAATGTTGAACTGGATCTGGGCAAAAATCATCTGGCACAAAGCCATCAAGGATTCTCTTGATGATTGATGAGCTGAAGGTAGGACAAAGCTCTTTCCTAGTACTGGTTTCCATGAGCACATCCTTAGGGATCATTAGGAGATCACTCAATGCATTTAGGAGATAAAATGGTTTGCGGAGTTCGGCAGCACCATTGTCACCATCCCCACTCTCAACTTCTGGATAGTCATCCATATCCATACCAAACGAGTCACTAAGACATCTGGACCAGCTGCCAATAGCATTTTTCAGTTGGACCCCAGCACCAAAACTAAATTTCCCAGATGGTACAGGAAGGACCTTAGGATCAGTTATTGGGTCAGACATGGGATCGGTTGGAATCTCATCATCTGATTCCCTCAAAATAGCATTGAACATTGCTACATCCAATCTAGCTATGCATTGCTCCATCACCAATTTGGCCAACAAAGGGAGACATCCACACTCATGTCCAGCTGCTCTTACTGGGCAAAGCTTTTCAGATGCTTCCTTGAAAGCCTTCTTCCATATGTCAATTGATAAGGTTGCTTGTTGCTGATTGCCCACAACAGTAATCCTTCCATAACATTTCTTTGCATTTGAACTAGGCATCGGTTCACTGCTTATATTAGCAGATTGCATATGTGGTGTGAATGCCTGCCACCAAATGGATTCGACAATTCTTGAGAATATCCATGATTCAATCTTCTTAAGTGCGGCTATAAATGTGTCAACATCTTCCCAGTTATCAAACTCAGGGGAAAGCAATTTTCCTTTCTTCCGGTTAAGCGATTCCCACATTGACGCAGAATTCCTCCTTGGTCCTGTTTTGGAACCATTATTGATAGCATTGCTGTTCGATTGTTTAGAAGTTTCAGAAACAATTGCTCGCAACACCACACAGTTTGATAGCCAGAAACTCAACCTTGCAACATCATATCCACAAGCTTTTGCAACCAGAACCAAACCAGAGGAAGCACTTCTTGCTGCACTCCCCATCTTGTCTCTAGACCAGTTTTTAAGCGCATGAATGAAATGCCTAGAGAGTCTTCGTGCTGGTGTGTGTACCTTGTTTGATGAGCTACCATGTTCAGCGATCACCGAATAAAGGCCTATCTCGGCAGCAGCAGTTTCTCGCAACTCTGCTTCAAGCAACTCAACCCTAAGTTCTAGTTCTCGAACTTTGGTGTCGTTACGATTATTTGATATGCGTATTGGCACCTGAGCTTGTGCTCCATCATAGGTATCAGTCCTAGTATCATTAGAGACCGCAATATCTTGGGAGTCAACTTCTTTCACTTCTTCCTTCTGGGAATCAACTTTCTTATTAATGACACTACCACTAAAATCCGGAACTCTCATACTGTACCTCATATTCTTTGCTCTATCACTAGTTAAAGTGCTATATGTTCTCTCCCCAAAGTTTCTTTGGTTGGAATCACTCATACCATAAGCAAATGACATTTTACGACCAGCTCTGAGAGCATTTTGTGCTGGAAAAGATGGAGTTTGTTCACCAGGCAAATCTGATAAAAGAGACAGATTCCCTGGATGGCCATTTGCCTTTTGGACTTGAATTGGATACTTTTCAACTTCTTCGCTCCTCACTTTTGTACTGGAAGATGGCATTTCACGCTGGGAATCAAATGGTGATCTAGAGCCTTCATTACCAACTGTTCTTACATCCTTCCCCTTGAGAGACTCCTGAGATCTATTACTACCTGCACGCAAGTTCCCATCTGAGCGGTAAGGGTATGGAGCTTCCTCCTCCTCATCATCAGTAAATGAAGCAAACTCAGTATCCTCAGTGTACTCCGACATCAATTCTTTTGAATCCCTGTCCACTGATGCCTCCTTTGACAATGCATCTCTAGAGGAAACGCTCGAGTTATCACCATCCAAAGGCTGAATTCGAAGATAAACCATCGGCTGCACATTGTTTCTCAAGCTCCTCTTGGAGTTGAGCGGCACGGGAACACTCGTGTCCTCGTGAAACATCGCATGCTCCGCCAAGTCCAGTGTCGCAGTCCCTAAATGCTGCCCTTTCAGCTTATCCCTCCTTGGTTCATACAGATTCAGCTCAAGCAGGTTCTTCTGCCATTTCCCACTCTTGGATGACCCCTCCTTCTGAAAAACAGCCTGTAGGTTGATGAACTCATTAAATTCAACCTTCCCTACTGTGGTACCTGATCCAATTGAAGGCGCAACAGCATTGGTCTTCCCCGAATTGCGCTCGCCATTTTCCCAAAAGAGGACCACAGATTTCAAAGACTTGAGGGACTCAGAAGGGGGCCATGGGCTGATTTCTTGAATGAAGATATTGAAGTCTACATGGAAGGATGCATCCTTCCTCGTCTTGGTTCGGAGGCCTAGCACCATTGCTTCAACAGTTGATACACTCTGAGCTTAAATATAGTAATCCTAGTTGACAATTTGCACAATCTGGTAGTCCTCTCTCAATTATCCAACGAAAAGTCGACTGCCATTAAGTTCATTGACAAAGAAAAGCTCCTGGCCTGAATCGAGAACGCGATGCAAGATTGAGAATTGAGAGGAAGAGATGGAGGGATAGAGTAGAGGGGGGTTTGGTCACGTCGCGTGGAATGATTGGGCGACTGGGATGAGGAGGGAGGAGGAGTTCGTGGGCACGCAGTAGTGGTGGTGGTTGTCGGTGTGGGTTGTGGGGGAAGAAGTGAGAAGACGACACGGGATGCGAGAAGAAGAGGGAGAAGAGGACGGACGGACGGCCCGGCGTTCTCGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0121500.1 | 12 | 7443212 | T | A |
| Osa12LNT0121500.1 | 12 | 7441588 | A | G |
| Osa12LNT0121500.1 | 12 | 7441995 | A | G |
| Osa12LNT0121500.1 | 12 | 7442016 | T | G |
| Osa12LNT0121500.1 | 12 | 7442035 | A | T |
| Osa12LNT0121500.1 | 12 | 7444017 | C | T |
| Osa12LNT0121500.1 | 12 | 7444249 | T | C |
| Osa12LNT0121500.1 | 12 | 7444859 | T | C |
| Osa12LNT0121500.1 | 12 | 7445152 | A | C |
| Osa12LNT0121500.1 | 12 | 7445723 | T | C |
| Osa12LNT0121500.1 | 12 | 7445812 | T | G |
| Osa12LNT0121500.1 | 12 | 7446425 | G | A |
| Osa12LNT0121500.1 | 12 | 7446576 | A | T |
| Osa12LNT0121500.1 | 12 | 7447553 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0121500.1 | osa-miR812v | Cleavage | 3.5 | 11.279 | 1 | 24 |
| Osa12LNT0121500.1 | osa-miR7692-5p | Translation | 5.0 | 19.12 | 1 | 24 |
| Osa12LNT0121500.1 | osa-miR7692-5p | Translation | 5.0 | 12.89 | 1 | 24 |
| Osa12LNT0121500.1 | osa-miR166a-5p | Cleavage | 5.0 | 14.142 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR166e-5p | Cleavage | 5.0 | 14.142 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR399e | Translation | 4.5 | 24.353 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR399f | Translation | 4.5 | 24.353 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR399g | Translation | 4.5 | 24.353 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR166l-5p | Cleavage | 4.0 | 14.142 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR169i-5p.2 | Translation | 3.5 | 16.253 | 1 | 22 |
| Osa12LNT0121500.1 | osa-miR416 | Cleavage | 4.5 | 17.676 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR396e-5p | Cleavage | 5.0 | 23.929 | 1 | 21 |
| Osa12LNT0121500.1 | osa-miR1873 | Translation | 4.5 | 18.493 | 1 | 24 |
| Osa12LNT0121500.1 | osa-miR1879 | Cleavage | 5.0 | 17.936 | 1 | 24 |
| Osa12LNT0121500.1 | osa-miR2095-3p | Cleavage | 4.0 | 12.835 | 1 | 20 |
| Osa12LNT0121500.1 | osa-miR396f-5p | Cleavage | 5.0 | 24.146 | 1 | 22 |
| Osa12LNT0121500.1 | osa-miR2105 | Cleavage | 4.5 | 12.766 | 1 | 20 |
| Osa12LNT0121500.1 | osa-miR5146 | Translation | 4.5 | 10.123 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0121500.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0121500.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0121500.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0121500.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0121500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121500.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0121500.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)