© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0121900.1
TAAGAATTTAACAAGCCTCATGCATTGCAACAAAACAGGCTATAAATACAGATATTTAATCTAGTAAATTCACACTTTGGACAACCCTGATAGACCACATAACAAGCAGAAGATCTGACAAAACAGGAACATAGGGGAAAAAAGAATTTACAAAAGAATAGCTCTGGGGTGCACTTCTGTTACCTAAAAAACGGAATGCACCATCACAAAAAAAAAAAAAAATCTAACTTAAGGCCCTGTGTCACTCACCAACTGTGGACGACTTGATTGCGCGTGGAATGGAACTACCATAATACATCAATTCCAACCTCTATTTCAAGTCACCTTTGCCGTACCAGATGCTTGAGTAACTTACATAATTATACAGTTGCACTTGGATTCCAGTTTTGGAGGCTTCATGCTCTCAGATGTCCTTGTAATTCCAGAAGAGGAACGCACGGGTGAGTGGTCTGTAGAGATATCATCTTTCTTTTCAGCATTTTCGGTTATGGTTGTTTCACCTTCCAATCTTTTCCTTTTAACCTTACGGTTAGGCGTTCGTCTGTGAGTCAGCTTAAGTAAACCATCCTCCTTTGGAATAGACTTTCCAACGATGGTAACAGATGGGCGAGTAGGCTCTGCGTGTACTCGTTCCTGCTCATGGTCCAGTGCAATTGTCGCTGCCTTGTATGCAAGGTCATGAACAATAGAACTGCAGAGGAGAATTGTATCGGTAGCTTCTTCCAAAGTGAAGCATCTCTGAATTTCTTTCCTCGATCCTTCAACTGCCTCGGGTGATTCATCATTAGGAAGTTCCTTTATGTTAGTATCTGTTCCAGAAACCAACACGTCATCCTCAGAGACAGCAAGCGTGCAACAGCCATTGGATTTATTTTCCTCATTTGAAGACTGAACTGCTTCAGACTGCATTTGAAGATCATCAAAGTTGTTCTCATCGCTTGGATGCTCTAGGGTGCTGATTGTATAGCAGTGTGCTTTGGTGGAAGTATCTTCCTCAGTTTTTGGTATATAACTTTCCTCAGCAGCTGAAGATTCTAGGGCATCACTTGGCATTTCAATATCTGATAAACACAAGTTAGTGCTCAAATGATCATTGTCAGCCACCATTTCCATATTATGGTTCTTAATAAGTATATCTTCTGTTTCACTTAACCTATGAAAACCTGAGGTGTTCAAGTCAACAAGGATTTCATCATTGATTATCGGCTGCACAGCAGATGAACACTCCATACCACTTGATAAAGCATCCATACAAGAGCTGTCATGTTCTTCAATAGAGACTGTTGTTCTCGATGCACTCCTTTCCAGCGTGTCAATTGGGAAACAAGTGTCACCAATAACATCACTCTGAGGGCAAAGTGAAGCTGATGAACCACTAATTGACATATCTGACACTGAAGCAACACTTTGATGGCTCATGGTACTGCTCATTCGAGCCTTCTCGAAATCACCCCTCTTGCCACTCCTGAGACGCTCAAAACGTACATCTGATTGCCTTGATGACCCTAGATCAATGGAAGAAGTTGCTGAAGAGCTATCCCGTCCAAAGCTACGCCTCATAGCACTGATACTATCCCTTGTATAATAGGGTTCTGAACAAAGAATATTTGTTGCAGACAGAGTCCTTCCTTCCACAACAGGCCATTTATTGCTACTTGACTTCTGGAGTAAGAGTACCGATATCCCAGTGGCATCAGTGTTTTCTACCTTAGGACTTGAATATGCTGTTGATCCCAGTTGATAATTATCACCAGAGGCAGTTTGAGAGATGGAATCATTATGCTGGCGGTTTAGCTCAGGAAGGCATTGTGGCAAGCTTTCACTGTGGCTGTTAATTTGGTCCCTGAAATGCTCGTGTTCTGCAGATGCTTGTTGGTTATCACTTACCTTAAATGGATGAAATGAAATATCATTGTTATTTCTTAGAGAGTCATCAACATGATATGGCTTTATATTTTTGGTATGATTCATTACCTCATGAGCCAGCAGCATTTCCTCATTTGTGTCCACCATTGACTGAAGTGGGGAACATGCTTTTATACAATCAGCTGGAGGTTCATCATTAAATTGATGACCAAGAGATGCTTCTTCCCTATACTCTACACAATCCGAGGCTATAGAAGTTCCAGATTCAGCATATGATTTACAATTTGCAGTTATTTCGTCCTGTTGGTGTGCTTCTTGTAAAGTTTGTGTCACAGGGCCTGCAGAACATATGCTAAGCAATAAACCACATTCTTCACAATAGTCACCTTGTCTATCCACATCCATAACCTTGAAAACGTTCCCGCACCTGGTGCAAGTAGCCATTTCACCATATCCAACATGAGAACTGTTTGTACCAGAAGTCTGACTAGCTGCCCAACCCTTTTCCATGTCAATGTCCTGTCTATCACTTTCCACAAATTTTGTAGTCTCCTCATGACTGGTTTCTTCATTCAATTCATCCAATTTATCAAACATAAATATATCACCATGAACTTGATGGTTATCATCCCATTCACTAATCTGATCATGCTGCTCTTGGTCGTTATCCACATATGGGCCGAAACTGGCACTATGCTCAGAGCTTGCATTGCTGCTAGTTGTCATATAAGAATTATGAGAAAACATAGGCCGCTGCACAACATTTCCTTTGCCAGCATTAAATGTCGTAGTAGGGACACTTGATAGCAGTGGCCGGAACATATTATTGGGAGCTTTGCGATGATCCATCAACCAAACTGCAGAATCAAATGACCGCTTTGGGACAGAACTAGTGGAAAAAGTTGTGGACGGCTTCTTTGATGAAGCAATAGTTCTGGTCTTCATCATAGACAAGCTCTTTTTTACAGCTGGGCTGGTGGAATAGGCAACTGGTAGAGACTGCATGGAATCCAGATCATCTTCACCAGAAGATGTTGCAGAAGCTTTGCTATACGAGCTTAAACGATCTCGTTCAATACTATGAGATGAACTTGCTCTTCTAGATGGAGTAGGCGATAGTGATTGGCGTCTGCCTCTGGAACCCATGTCCCTTCCACTGATAGGAGGAGAAGGGGATCCACCCCTTGAATGGGATAATGGATGATCTGGCAGAGAAGTTCGAAGATTTGCAGGTGCATCATGAGAAAATCCAGGAACATTTGAATGCCATCCTTGAAGTTTTGGTGAAGAAGATATGCGGTTAGTTTTAACTGGAGAAGGACCCCTTGTCCTATTTAACGCTGGGGTTGAACCAGTACTCATCCTCCTTGAGGCAGGACTAGGAGACCTCCGTGGAGGTGTTAATGTTGAGGCAGGACTTGGAGATCTCCGTGGAGGTGTTAATGTTTTTGCAGATGGAGGAGTTGAAGGTCTCCATGATGGTGTTGGTGGTTGCAATGCAAATGGTGGACTAGAGCGAGAAGCTGCACTAGAGGGTCTTGTCCTTGACATGGAGCGTGGTGATGGACTAAGCCTAATAGGGCTTGCACTGCTTCTACTAGACCTTTGAGTATTGTCCACTGTGGATGACCCCGAAATTCGTATGGGCTTACTCTTAGTTCTGCCCCTAGAATCCTGACCAGCAGACTGTTCTTCTTCATCATCCAATGAACGGAAAAGTGGGGTCTCTGGAGGAGTCAACAACCACTCATAATCATTTTTGTCACCATCAACGTCAAGCAAATCATGGCTTTCTCTCCGTGTAGGGATGTTGACACCAAGCTTGACATCAGGGAAATAACTCAATTTTGAGATTGACTCATCAAAATCCTCAGAGGGTTCCAGTAAGAAATTATCGTTCTCAATTTTCTGCATATCAGCAAACAAAGTGAGATCCTCATCCTTTGGTTTAGCAGGCAGAGCATTCCCAAAACTGTTGACCCTCCTGAGGAAAGTTTCCCTTGAAGGAGATCTCCTTGTTGAGGGTGAGGGTGGCATCTTTTACGGCCTTTTGATCTGTCTAAATGCTTCTATGCTCCTTTCTGAGAAATAAGACCAGAATCATAACCTGTCTTGGGTAACCTAACAAGTGGACCAAAAACCATAACCTGCAATCTCCAATTAGATTCAAACCATCCGCGTCGCCTCCAGCTTAGCTTCAATCCAGCGAGCTCCCCCGGTGACAACGCCGCACTGGGGAGAGACAAAAGCTAGGGCGGGTCCCAGAACGAGAGAAGCAGAGAAAACCCCACACACACCGCACCTCCGCGCCGCGTTCGCCGGCGTCCGCGCGCGCGCAAGCAAGCAAAGGAGGGGAGAGGCTACGTCCGCCGCCGCGCCGGATTCCGCCGCAAGCAAGCGAGAGCGAGGCGAGGCGAGGGGAGGAGGAGTGAGACGGAGGCAAGCGAGGAGGAGAGAGAGAGAGGAGGAGGCAGTTGAGCTGAGAGAGGAAGAGGAGATGAAATTTCTGGAGGCAGAGCTAAATTAATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0121900.1 | 12 | 7690049 | C | T |
| Osa12LNT0121900.1 | 12 | 7690287 | T | C |
| Osa12LNT0121900.1 | 12 | 7690326 | A | G |
| Osa12LNT0121900.1 | 12 | 7690416 | A | C |
| Osa12LNT0121900.1 | 12 | 7691188 | A | C |
| Osa12LNT0121900.1 | 12 | 7691294 | A | G |
| Osa12LNT0121900.1 | 12 | 7691463 | C | T |
| Osa12LNT0121900.1 | 12 | 7692159 | A | G |
| Osa12LNT0121900.1 | 12 | 7692452 | C | T |
| Osa12LNT0121900.1 | 12 | 7690022 | A | T |
| Osa12LNT0121900.1 | 12 | 7693078 | G | A |
| Osa12LNT0121900.1 | 12 | 7693164 | T | G |
| Osa12LNT0121900.1 | 12 | 7693500 | T | C |
| Osa12LNT0121900.1 | 12 | 7693571 | C | T |
| Osa12LNT0121900.1 | 12 | 7693620 | A | C |
| Osa12LNT0121900.1 | 12 | 7695154 | C | T |
| Osa12LNT0121900.1 | 12 | 7695337 | T | C |
| Osa12LNT0121900.1 | 12 | 7695521 | T | C |
| Osa12LNT0121900.1 | 12 | 7695608 | G | A |
| Osa12LNT0121900.1 | 12 | 7695825 | A | T |
| Osa12LNT0121900.1 | 12 | 7696783 | C | G |
| Osa12LNT0121900.1 | 12 | 7696889 | A | T |
| Osa12LNT0121900.1 | 12 | 7698264 | T | C |
| Osa12LNT0121900.1 | 12 | 7698332 | C | G |
| Osa12LNT0121900.1 | 12 | 7698595 | A | G |
| Osa12LNT0121900.1 | 12 | 7698977 | G | A |
| Osa12LNT0121900.1 | 12 | 7699153 | A | G |
| Osa12LNT0121900.1 | 12 | 7699164 | C | T |
| Osa12LNT0121900.1 | 12 | 7692963 | A | T |
| Osa12LNT0121900.1 | 12 | 7692460 | A | G |
| Osa12LNT0121900.1 | 12 | 7692667 | T | C |
| Osa12LNT0121900.1 | 12 | 7692750 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0121900.1 | osa-miR5534b | Cleavage | 5.0 | 19.568 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR156f-3p | Cleavage | 4.0 | 20.134 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR156h-3p | Cleavage | 4.0 | 20.134 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR166b-5p | Translation | 4.5 | 22.994 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR166d-5p | Translation | 4.5 | 22.994 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167a-5p | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167a-5p | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167b | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167b | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167c-5p | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167c-5p | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR395f | Translation | 4.0 | 9.988 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR156l-3p | Cleavage | 4.0 | 20.134 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR319a-5p | Translation | 4.0 | 18.553 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167d-5p | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167d-5p | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167e-5p | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167e-5p | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167f | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167f | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167g | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167g | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167h-5p | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167h-5p | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167i-5p | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167i-5p | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR166h-5p | Translation | 4.5 | 22.994 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167j | Cleavage | 5.0 | 19.448 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR167j | Cleavage | 5.0 | 16.019 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR437 | Cleavage | 4.5 | 17.095 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR1861e | Cleavage | 4.0 | 24.329 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR1861k | Cleavage | 4.0 | 24.329 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR1861m | Cleavage | 4.0 | 24.329 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR2090 | Cleavage | 4.5 | 9.986 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR2090 | Cleavage | 5.0 | 17.978 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR2095-3p | Translation | 4.5 | 13.991 | 1 | 20 |
| Osa12LNT0121900.1 | osa-miR2867-3p | Translation | 4.5 | 12.242 | 1 | 20 |
| Osa12LNT0121900.1 | osa-miR1862f | Cleavage | 5.0 | 20.288 | 1 | 20 |
| Osa12LNT0121900.1 | osa-miR1862g | Cleavage | 5.0 | 20.288 | 1 | 20 |
| Osa12LNT0121900.1 | osa-miR3980a-5p | Cleavage | 5.0 | 16.652 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR5160 | Cleavage | 5.0 | 13.524 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR5340 | Cleavage | 4.0 | 8.65 | 1 | 23 |
| Osa12LNT0121900.1 | osa-miR5500 | Cleavage | 4.0 | 19.383 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR5537 | Cleavage | 5.0 | 11.383 | 1 | 22 |
| Osa12LNT0121900.1 | osa-miR435 | Cleavage | 5.0 | 15.923 | 1 | 20 |
| Osa12LNT0121900.1 | osa-miR3980b-5p | Cleavage | 5.0 | 16.652 | 1 | 21 |
| Osa12LNT0121900.1 | osa-miR5485 | Cleavage | 2.5 | 20.56 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0121900.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0121900.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0121900.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0121900.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121900.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121900.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0121900.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0121900.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0121900.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)