© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0122500.1
GCTCCTGTTCAAATAGAATTCAAACTATTACATGGATCATGAGAAGAAAATAAAATGGTGCCAAACATAAATAAAAACAACCGTAGCAAATGGAATACAAATACTGTGTCCAGAGAATAGAAGATCTACACACTTGCGTCCAAGTATAAATTTACATCTTGCAGGACTTGGCCCTCACTCGATTTACAAGAGGAAATAATGTCTTTGAAAAATGCACTGCCTTCTGAAGCATCAACATTAGGTGCCTAAGACCGAGGGAAAATCCAAAAGAAGCTTGCATTGAGTGGTTGCCATGGTCAGCAATCTGAGTTGATTTCTTTTGCTGGCAAGTTATCTTCAGGACTTGCATGCATCACAGCACCCCAATCAATTTGCATAATCCAACATGAGTGTAGTTCAAGCCTTAAGATAGTTTAAACTCCAGAGTAGGCCCCAGCCGTGCTCCATCGTCACCAAAGTTCAACTTTCAAGAATTGCTCTCTCACTGTAGAACATCTTCTTTAGCAGAAGAATCCAGAATATGGTTGTGGCAAACATGAACTTTGGAGCATTATAGCCTGGAAAGCTGGACCTCTCTTTCACCACTGCAATTGTGATGTCAGTTTGTCACCCTGTTGATGCTGAAGTCAATTCAAAGCATGGAACAACCCAAAACTGTGGAGTAGAAGTACTGCCTTCTTTTTTTTTTGAAACAGGACACAGCCATACAGATAAAAGTAAAATAAAATATAGAATAGAACAAATATAGATTCCACGAAAGAATGTACAGATCCATATCGTAGTTATAATACTTTTGCCAAATTTGTCAATTTGTAACTTATCATATAGATACTATCCAGATACAGATTAACATGATAACATCTCGGCACACTAGATAAATATTGGAAGTTATAGTTTTCACTTTTTGGTCATCCTAACTGCAAATTTGAAGAGCTAGCATAAGGTAAACTTTACCCGTACATAAATATGATGGCCCTGTATGGTCGAGAAGGTTGAGTATGGATTTCAGAAGTCAGAACTACTCCAATCTATCTCATTTCATCCATTTCCGGGACAGAGTCTATGACCAAATATACCTAATTGACAGACATAATAGACTGATATATACTCATCTTAATGCTGATTGCTGTCAGGTCAAGCCGCAAAATTTCTAATATGCAGCTGATGATTACTGAACTAGTTATGCCTGCATGCCACTGTAATCCTTATTTACAGTAGTGCGAGATTTTGTTAATACGGTGACAGTGTGACACCTATCAGTATGGGACCATTTGCCATACTCTGTTGCTTTATCGAATTTGTTACAGGTGAAAAGTTTTGTACCACCACAGAGGTGCACCATCTGTTACCCATCCCCCACAAGAAAAGCTTGCAACTTGTTGCCATCCTGATCCTGTACCCAGCTATAGGCTGGATTTTTCTGTACTTTCCTCGATTTCATTAATTTCCTGATCTTGTTTGCTTCATTCCATCTCCCAGTCTCAGCATACATGTTTATCATAAGAGTATAGTAGCCTGAATGCTCTGGCTTCAATTCAAACAAATGCTCTGCTGCCCATTGTGCTAATTCGATATTTCCATGTATACGGCAAGCCCCAAGCAATGCTCCCCAAACATCGGAATTTGCAGGAAAAGGCATGTCTCTGATAATTTCAGCACATTTAGACAGTTGTCCAGCACGCCCAAGAAGATCAACCATGCAAGCATAGTGCATTTGCTGTGGCTCAATATTTTGAGCAACCATCTGACTGAAGTATTTCTTCCCTTTGTCTACAAGCCCACCATGGCTACATGCTGCAAGCACTGCAATGTAGGATACATGATCATAGTCCAGACCATCACCTTTCATCAGTTCAAACAATTCAAATGCAATATCAATTTGACCATGCATCCCATATCCCAATATCATAGTATTCCATGAAGCAACATCCTTCTTTGTAATCTTATTAAAAATCTTTGATGCAGTGACAAGCATTCCACCTTTAGTGTACAAGTCCAGCAAGGAATTAGAAAGAAAGGGATGGCCACTTAACAATCTCCTAACCAAAACACAATGAATTTCTTTGCCATGCTTAAATACAGATAAGTTGGTACATGCTGATAGAGCTCCCATGAAGGAAACAGCATCATAATCAATTCCAACAGACCTCATCTGCTTAAAAAGAAGAAGAGATTCAAAACACCATGGACTCTGTGAATATCCCAAAATCAAAGTATTGTACGATACATCGTCCTTCTCTGACCTTTCAAAAATATTCCGTGCCAAGCTCAGCTGTCCGCATTTGGAATACATATCAATCAGGGCATTTGATATGAACAAATCGAACATTAAGCCTCTACGGATCGACCATGCATGGATCTGCTTACCCATCTTTAGAGAGGCCATCCTCGCACAAGCTGGAAGCACATTCACTAGTGTGATAGAATTTGGGCATTCCCCACTTTTTTGCATATCTGTGACAAGCCTGAACGCCTCAGTCTCAGCTCCATTTTGCACAAGATTTGCGATCATTGCATTCCATGACACAACATTGCGGTCCTTCATTTGTTCAAAGATGGTAGATGCTTTCTCCAAAGAACCAAATTTGGCATACATATCAACAAGTGAGTTGGCAACAAAAATATCCAAGTCCATTGCTCTCTTTATGCTATACCCATGCACCTCCCTTCCCAAATCAAAACTTCCAAGCTCAACCAATGCAGGAAGCAAACTAGACAATGTGATAGAACCTGGCATGACATTATGCTCTGACATTTTCCTAAACATTCTCAGCACATCACCATAAAACCCTGCATTAAGAAAGCATCCTATTGCAGAATTCCAAGAAACCTCATTTTGTTCCAGCATTCCATCAAACACCTGCATCGATGCCTCAACATCCCCAAACTTACCATACATATCAACCAACGCATTCGCGAGATTCACCATGGTGTTCAAGCCAACTTTCACTGCCAACGCATGGATGCTCAACCCAAACTTCTCCTCTTGCTCTGTGCCGCAGGCAGGCACAACTGACACTAAGCTTGCCACGTTCAAAGGAAACCCACTCCTCATCATGCTCACCAGCGCCCGTCTCGCGTCATGAAACATACCGTTCACCAAGAACGCTGACACAAGCGAGTTCCACGAGACGACGTCCCGCTCAGGCATTTCGTCGAACACCCTGCGCGCGTCGCAGGCCTTTCCACAGGCCGCGTAGAACGCGACGAGGGTGTTGCCCGTGAAGACGTCAGCCAGGTGCCCCCGCCTGAGAGCCGAGGCGTGCAGCTCGAGGCCCTTATCCTCGGCGGAAGCGACAGCCGCGGCGGCGGCGTGGAGGGCGAAGGGAAAGGTGCGGTCATCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0122500.1 | 12 | 8824127 | G | C |
| Osa12LNT0122500.1 | 12 | 8823832 | G | A |
| Osa12LNT0122500.1 | 12 | 8824027 | T | C |
| Osa12LNT0122500.1 | 12 | 8824524 | G | A |
| Osa12LNT0122500.1 | 12 | 8824601 | A | T |
| Osa12LNT0122500.1 | 12 | 8824754 | C | T |
| Osa12LNT0122500.1 | 12 | 8825926 | A | G |
| Osa12LNT0122500.1 | 12 | 8826359 | T | C |
| Osa12LNT0122500.1 | 12 | 8824399 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0122500.1 | osa-miR815a | Cleavage | 4.5 | 7.336 | 1 | 21 |
| Osa12LNT0122500.1 | osa-miR815b | Cleavage | 4.5 | 7.336 | 1 | 21 |
| Osa12LNT0122500.1 | osa-miR815c | Cleavage | 4.5 | 7.336 | 1 | 21 |
| Osa12LNT0122500.1 | osa-miR1852 | Translation | 4.0 | 17.391 | 1 | 21 |
| Osa12LNT0122500.1 | osa-miR1861b | Cleavage | 4.0 | 14.254 | 1 | 22 |
| Osa12LNT0122500.1 | osa-miR1861f | Cleavage | 4.0 | 14.254 | 1 | 22 |
| Osa12LNT0122500.1 | osa-miR1861i | Cleavage | 4.0 | 14.254 | 1 | 22 |
| Osa12LNT0122500.1 | osa-miR1861l | Cleavage | 4.0 | 14.254 | 1 | 22 |
| Osa12LNT0122500.1 | osa-miR2866 | Translation | 3.0 | 14.384 | 1 | 20 |
| Osa12LNT0122500.1 | osa-miR2878-3p | Translation | 4.0 | 18.561 | 1 | 24 |
| Osa12LNT0122500.1 | osa-miR5081 | Cleavage | 5.0 | 16.818 | 1 | 22 |
| Osa12LNT0122500.1 | osa-miR5519 | Cleavage | 4.5 | 12.517 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0122500.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0122500.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0122500.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0122500.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0122500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122500.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)