© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0122600.1
GAAAATTAACTGAGCACAGCCTAATTTTTTTTTTTGAGAAACACAGTACAAACGCAGGCGCTCACAACATGCGCACACTCACCCCTATGAACGCACACACGCACACCCTACTCCTATGAGCACCTCCGGAAGACTGGGCCGGCATATCTTGAGATTGACGAAGTCACCACAGGCGCCTCGCTGTCGACGGGTACGTCGCCTACCACTGAAAGAATAATTAGCCGTAAATGCGAGCACCCGTGTCAAATCTAGGATTTGAACCCGGGTGGGCTGGTTCCACCACAAGGAACCTAACCAGTTGAGCTATGCTCACTTCGCTGAGCACAGCCTAAATTAATCAGACTTTACTGAACTTTCTTAATATTACATGAATACACAACTCATATGATTGGGCAAGCAAATACTTGCTACTTTTGCAGTTCGGAGGAGCTAGAATACTTCATTCGTTTTAGCTTCATTCTTGAAATTACATTAGGACCACCAATGACAATCTCTCCCTGAGGTATTGGGGAGTCACTTGTTAAGTAGTATCCATCTTCTGATCAGTCAATCAGCTGGAGAATATAATTACAAATATGTTAAGCATGGGTGAGATGCCAACATATAATAGTGACTTAGACTAATATGGAGATCAATCAGATATTATACTGAAAAAAGATCAGCAAATTACAAATATCAAAGCAGAGTAGACAAGATCACTATATGCTCCGATTAATTCTTTGACTTGGATCCCAAATAATTTGTTAGCTGCAACTATTTCTCACTATAATTTGTGGTAATTCATTTATAAAAAGATAAGCTAGTAACACTCCTTCTAACTTGCCTTCTAACCTTACAATAGTCTCATATGACTAGGTTGTGTGAAGGGAAAAATTTGGACAACTATTACAAATCTCCTTTGCCCTTTGTCACATTTTGAGAAAAAATATTTTGACAATTGAATGACCCTGGAGGAAGTGGCCTTTATGTTCGGTAGTTTGGTACTATATTCAATATATGCATTGACATGAATCAAGGCCAAGTAGGATAATGTATTAGATAATGCAAGTTTCAAATGTTTGTTACATAAAAAAAAGATCATGATAAAATATTTCTATTCCAAGAGTGCGATTCTTGCAAGCCAAGTCAACTATTTTCTCCAAGTAAGGTAGGGCTATGGCTGCCCAATGGGTTGGTTGCACAGCCAGGTTCCAACAAATGTATATTAGTTAATATTAAATTTTTTAAAGGATTTGATTTCAAATTTTAACTCATTATTCACCAACTAATTCAAGACAAAGCATCAAAAAGACAAACTTGCAGAGGAAAATTGGATGTAGTTTACTACTGACAACCTGACTTCCCTTAGTTTCTTCTCTAAACTTGTCAACATGAAGAACCTCACATGAGCCACAAATCACGGAAACTGTTACAGTTCTTTGATTACAGGAAGCAAATACCTCGTTGGCGCCGTCGATGGCGAGGTCGATGCGTGGGTGGTCGATGGCGAGGTTATCGAGGGTGGAGAGCAGGATGCCGAGCGACTGCGCCTACCCAATCCCGCCGCCACCTCCCCTTTTCTTGAAGCGACCTCCTCCTTGTAGAAGCCTGAAGCGACCTCCCTCTCGGGCTCTCGGCGGCCTCCTCCTTGCAGAACGGGAGCAAGTCTGGAGATGGTGGCGGCGCGCGGCGGTGACGGCGAGCGGGTCACGGCGTAGTAGAAGCGACCTCCCTCTCGGCAGCTCCTCCTTGCAGACCGGGAGTGAGTCCGGTGACGGTAGCAGCGCTCGGCGGTGGCGGCGCATGGCGGTGGCGGCTCATAGTGGTGGCGGCTCGTGGCGGTGGCGGCTCGAGGCCGCGGCTAGCGGAGCTGGCGGCGCGCGGCGGTTGCGGCGCACTCTGCACGGGCAAGGGTTTTCTATCGGAATTCGGGAGTTCGGGAGTGGAGTCTAGGGTTTGGGTGTCTTTTGGGGGCTAACCCATGGGCTGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0122600.1 | 12 | 8810174 | A | G |
| Osa12LNT0122600.1 | 12 | 8810261 | C | T |
| Osa12LNT0122600.1 | 12 | 8810065 | T | C |
| Osa12LNT0122600.1 | 12 | 8810082 | C | T |
| Osa12LNT0122600.1 | 12 | 8810226 | C | G |
| Osa12LNT0122600.1 | 12 | 8811643 | T | G |
| Osa12LNT0122600.1 | 12 | 8813132 | T | A |
| Osa12LNT0122600.1 | 12 | 8813537 | G | A |
| Osa12LNT0122600.1 | 12 | 8813602 | A | G |
| Osa12LNT0122600.1 | 12 | 8813611 | T | C |
| Osa12LNT0122600.1 | 12 | 8813630 | T | C |
| Osa12LNT0122600.1 | 12 | 8813636 | A | T |
| Osa12LNT0122600.1 | 12 | 8813691 | A | G |
| Osa12LNT0122600.1 | 12 | 8813939 | A | G |
| Osa12LNT0122600.1 | 12 | 8814020 | A | G |
| Osa12LNT0122600.1 | 12 | 8814202 | T | C |
| Osa12LNT0122600.1 | 12 | 8814544 | A | G |
| Osa12LNT0122600.1 | 12 | 8814581 | T | A |
| Osa12LNT0122600.1 | 12 | 8814756 | T | C |
| Osa12LNT0122600.1 | 12 | 8815190 | T | C |
| Osa12LNT0122600.1 | 12 | 8816215 | A | G |
| Osa12LNT0122600.1 | 12 | 8816267 | T | G |
| Osa12LNT0122600.1 | 12 | 8816289 | C | T |
| Osa12LNT0122600.1 | 12 | 8817544 | A | G |
| Osa12LNT0122600.1 | 12 | 8817600 | A | G |
| Osa12LNT0122600.1 | 12 | 8814302 | A | G |
| Osa12LNT0122600.1 | 12 | 8817728 | A | G |
| Osa12LNT0122600.1 | 12 | 8817731 | A | G |
| Osa12LNT0122600.1 | 12 | 8817965 | T | C |
| Osa12LNT0122600.1 | 12 | 8817986 | T | C |
| Osa12LNT0122600.1 | 12 | 8818200 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0122600.1 | osa-miR167h-3p | Translation | 4.5 | 14.614 | 1 | 21 |
| Osa12LNT0122600.1 | osa-miR171i-5p | Translation | 4.5 | 14.812 | 1 | 21 |
| Osa12LNT0122600.1 | osa-miR426 | Cleavage | 4.5 | 16.003 | 1 | 21 |
| Osa12LNT0122600.1 | osa-miR438 | Translation | 3.5 | 9.927 | 1 | 21 |
| Osa12LNT0122600.1 | osa-miR2873a | Translation | 4.5 | 8.731 | 1 | 24 |
| Osa12LNT0122600.1 | osa-miR3980a-5p | Translation | 4.5 | 21.912 | 1 | 21 |
| Osa12LNT0122600.1 | osa-miR3980b-5p | Translation | 4.5 | 21.912 | 1 | 21 |
| Osa12LNT0122600.1 | osa-miR5157a-3p | Cleavage | 4.0 | 11.833 | 1 | 24 |
| Osa12LNT0122600.1 | osa-miR5157b-3p | Cleavage | 4.0 | 11.833 | 1 | 24 |
| Osa12LNT0122600.1 | osa-miR1320-5p | Cleavage | 4.0 | 9.491 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0122600.1 | 12 | rv12-2 | Resistance or Tolerance | Drought tolerance | RM491 | RM101 |
| Osa12LNT0122600.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0122600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122600.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0122600.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0122600.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)