© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0122700.1
GGATATCTGAAGCATGAGTCAATTGATTCTTACAATCTAATGGTCTACTAGAACAGAAATATTACAACATACTCTCGCATACAAAATTACAATGTCTGTCTTTTCAAATGAAAGCACTGGACCGGTAAACTCATCAACTTCAGGACAATATAAGCAAATTGATACTCATACATTAAAATATGATAGCTATAACATTTTTATACATGGGAATAATGGTACCTCAATCTCGGCTGATAGCGAAATCATGCCAAATAAAAAAAAGTGTGTCATGGAAATAACATTGGTATGATTCCTGCTAAAAGTAATAGCATACAAATTATGAATTCTCTGATAACCTGCTTGGAGAATTATCCATATTCAAACCGATACACATGTTTCGCATGTCTTACCATGTCATGTCAGGAATACGCTGTTCAAAAATGCGTATCCAGCAACTACCCCACCTTCGTTCAGTGAGGCAGCCTTGGTTCTCATCAAATAACCACACTGGTCATTTATAATGACCCTGTCTTTGTTCCGCAGGTAGGCTCCAAAAATTCCAAATTCAGAAACCGCATTTTCCCGAATGCATGTGCCATCTCGGACTAGATAGCAGAGTGATGCTGGTGGAAAGATCCTCTGCATTAGGATGTAGGCTGCAAGTTCATTGCTTCCATCCTTCTTCAGACTTATCAGTGTTTCACGCAGATTGTCCCCATAAATGTTGTTTCCTCCACCCTCTCTTTGTGGCTTCAGAACAAACAATTCTGGTGATTCAATAGCAGACATGACTATACTGTCATTCTCCAAGCTCCATAGCCCTGCAAAGCATTTCCGAACTTTTTCTATGTCGGCTTTGTTGTCAAGAAACCTTTCGAGCACATTTTCTTTTGCCAATTCTTGTTGAATCTTTTTGGTTCCAACAAGATGGTGTGCTATTGATGGGCACTTAATAGCAGAGGAACACTCAATCAAGAGTCTTGCTCTCCATTCCGCTTCTGAAGGGTAATCATTTGGTGTATAACCTGCTCTGAAGTACACAACAGCAACTGGCAATCCATCTATTGTTAGTGTACCGTCAGGACGGAGCTCTCCTTCTGCATCTATTGCAGCCATTGTTTTGCGAATTGTCGTCACCCCATACATTTCTCTCAAGGCGACAGTTATCCAATATTGGTCATACATGTACCTTTCTTCTGGTTGAACAACCACCAGAACTACTGAACTTTGATTGTTGAACTCAGCCCATGCTCCAGCTAATGCTTCAGCATGCTGAGCAATTGCTGTGTTCCCAACAACACTCTCTGGATCCAAACCGAGCTCCCTCTCATGCTGCCTAATCAGGTTTCTGTGAAGTTCACATACACCGCAAGCAAGACCGTTGGATGATGTTGAAATGGTGTTGAGTTCAACTTGAAGAAGCTGGTCAGTGGCCCCATCAATCATGTAATCTGACCTAGTAAGACCCAACCTAACATCCTCTTTCTTGTTTAGTTTCATCATCTTTGCATGGATATCAAGAAGCCTTCCAGTGAATGAATCCACCTCTTTCGTTCTTGCCAAAGTCTCCTGCAAAAAATCCCCATCCAAACTAACACGATCAACAAGCTCATTGAAAAGGGGAGCCAATTCAACCGCCTGATCCCAGTAAACTTTCGAAAATGACATTGGCAGTAGAGCAAATGGGGCATGGAGCAAACCAACACCGGGAGCTTTTCCTGATCTCGGGTGGTTCTTGTCGCCAACGACGAGGCCGTGCTGCGACGACCACACCAGCGCCTCCTCGACCAGCTCATCCACCAGCCGCGCCGGCGCCACCGCCAGCTGCCCCTGCTCCGACGACCGCCGTCCGCCGCCCTCCACCTTGGGCGCCGCCGTCCCGACGGCGGCGGCGCACCTCGCCGGAGCGAGCAGCGGTGACGGCCTCGCGGCACCGCCCGGCCGACGCACCACCACGACTGGAAGAACCCTGCACCGGCCGAGCGAGGAGGCGAACGATGGCGGATGCGCGCCGGAACGGGCGGCGGCGGCGGCCATGGTCGATTGGGCTGTTCGATCGGAGTTGGTGGAGGTCGCGAGGTTTCTTGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0122700.1 | 12 | 9270064 | C | T |
| Osa12LNT0122700.1 | 12 | 9263664 | T | A |
| Osa12LNT0122700.1 | 12 | 9264847 | A | G |
| Osa12LNT0122700.1 | 12 | 9265181 | T | C |
| Osa12LNT0122700.1 | 12 | 9265747 | A | T |
| Osa12LNT0122700.1 | 12 | 9265776 | A | C |
| Osa12LNT0122700.1 | 12 | 9266603 | A | C |
| Osa12LNT0122700.1 | 12 | 9267485 | A | T |
| Osa12LNT0122700.1 | 12 | 9267637 | A | G |
| Osa12LNT0122700.1 | 12 | 9268155 | A | G |
| Osa12LNT0122700.1 | 12 | 9268409 | C | T |
| Osa12LNT0122700.1 | 12 | 9268131 | A | G |
| Osa12LNT0122700.1 | 12 | 9268604 | G | A |
| Osa12LNT0122700.1 | 12 | 9268634 | A | G |
| Osa12LNT0122700.1 | 12 | 9268847 | A | G |
| Osa12LNT0122700.1 | 12 | 9268956 | C | G |
| Osa12LNT0122700.1 | 12 | 9269114 | T | A |
| Osa12LNT0122700.1 | 12 | 9269305 | T | C |
| Osa12LNT0122700.1 | 12 | 9269588 | C | G |
| Osa12LNT0122700.1 | 12 | 9268755 | T | A |
| Osa12LNT0122700.1 | 12 | 9267281 | G | C |
| Osa12LNT0122700.1 | 12 | 9268082 | T | C |
| Osa12LNT0122700.1 | 12 | 9268862 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0122700.1 | osa-miR812t | Translation | 4.0 | 17.936 | 1 | 24 |
| Osa12LNT0122700.1 | osa-miR812u | Translation | 4.0 | 17.936 | 1 | 24 |
| Osa12LNT0122700.1 | osa-miR6246 | Translation | 4.0 | 10.339 | 1 | 23 |
| Osa12LNT0122700.1 | osa-miR6246 | Translation | 5.0 | 17.965 | 1 | 23 |
| Osa12LNT0122700.1 | osa-miR156a | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156b-5p | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156c-5p | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156d | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156e | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156f-5p | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156g-5p | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156h-5p | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156i | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR156j-5p | Cleavage | 5.0 | 18.968 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR169d | Cleavage | 5.0 | 17.461 | 1 | 21 |
| Osa12LNT0122700.1 | osa-miR172a | Cleavage | 5.0 | 14.79 | 1 | 21 |
| Osa12LNT0122700.1 | osa-miR172d-3p | Cleavage | 5.0 | 14.79 | 1 | 21 |
| Osa12LNT0122700.1 | osa-miR2931 | Cleavage | 4.5 | 15.659 | 1 | 20 |
| Osa12LNT0122700.1 | osa-miR812n-3p | Translation | 4.0 | 17.936 | 1 | 24 |
| Osa12LNT0122700.1 | osa-miR5078 | Translation | 4.5 | 20.636 | 1 | 21 |
| Osa12LNT0122700.1 | osa-miR5159 | Translation | 5.0 | 17.975 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0122700.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0122700.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122700.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0122700.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122700.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0122700.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)