© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0123300.1
TAGATGACAACTTTATTGCTTCTCTCTGTGTTTACAAAGTGCAACAACAACACTCCTTACAAAAATCTCGACTAAACTCGAAACCCTAACTAAACTATCAACTCCACGCTCTTAAAAGCGATTCCGAGAAGCCTCACGCTCCCCCTCTATTTATACATAAGGTAGGCAGCCTAAAGCCACGAACCAAACTCATACTAAGAGTCCTAAACACCTTAGGAAACCCTCTAGTACAAGAAACAAACTTTACATAACCAATCGTACCAAATTTGGACTCCTTCCAAATTCGACTCCGCATCCCATATGCACACAATACCTCCATCATATGCCATATGGAATCTCCATCAACCACGTGCATCAATTCTAGCCTAAGTATCCCGCATGATCTCTGACCACCACAGACGTCATCTTATCCCCAAGCCGACTCCCGGTCCATCACCGCAAATACTCTCCCGAGACATCAAGTCACCTACACATGGAACAAACAAAGAAACCATATTCCGAGACCAAGCTATCTCCAACTTGACTCATTAGCAGCAAACAATAGTATTACATACGTATAGTATCCACCTAGAAGTCATAATCACGAAATAAACTCGGATATCCAAATAAACAACCCGAAACCGAAACCGACACAGTGTCGGCCGGTCAGACCGCGGGCCAGCCGGTCTGACTGCACACATAGCGCCGGTCTGACCGGCAACCTCCGCCCGATCGGACCGGTCACATAAAATAACAGTGAATCCAATCATCACCTGAAAATTGATTATCTCCAAAACCACTTCGACGATAATCTCCAAATATCAAAACCAATAATCACATATGCCAATTGTTCATCACAGAATAAGAATCAAAACACACTTTGATCTTACACAAATATCATCAACAGCGACTAAGTACCTATGTAGATGTTATAGTGAATTAGTCAAGTTTAACAAGGCAGATATTGGTAAAAATAACATGAAATTTACTGAAGAGATACAGTGCAAACATAGTATACTGCTTCTGGAGAACAAATTCAATACTAAATGTGCAAAAGTATAAGTAGCTACCTGTCAAATCCTCTCAAAGAAAAGTACTATATATTATCCAAATGATGCCAAAACAACATGAACATTTTCATTGTGAGGGTTGAATTTCTAATGGTAGTAAGAAATATGTACAAGGCAAAAACAGTTCTTAAGAAATTTTGGTCAAGTGCATCAAAGTCTTATATTATCAAGTTTAACAATTAATTACAAATATGAGTAATGATTCTATTTACATGGGTTTTGAATTGGCTTGTATCAAATTGTACAGCAAAGGAAAAAGGGACCTCAACAAATGGAAACGACTTGAAAAATTTAAGATGAAGACTTTAACAGGAAAGTAAATGAAAGAGAACCAATTATTTTTGTGCCCACCTTCTACTTGTTAGGTATTCTCTGAGCTTATTGATTAGTTGTTTCTCATCATCTGATTTTTCTGCCTTGATCCCAACAACTTTTTTGTGCTTCTCATCATTAGAATTGTTTTTGTTGATCATATCTTTAAGCAAAACAAATAAGATCTTCTTAATGTCAGGACTCCGTGAAATAGATACTAAAGCTGTGCAATCAAACTGATGCTTGATTTTTTTAAGTACTTGGTTAGCAAGAGTAGTCTTGCCAAGGCCCCCAAAGCCCACAATGGAAACCACTTTCAGCTGTTGTGAGGATCCATCCTGTTTTGTCAACAGATCAATGATCTTCTCCATAGGGCCATGGATGCCAACAAGTTTCTCTGCTTCCACATAGAGTGCTGGTAGTCCAGGATCAATTTCAACTATGCGGGCATTGCTTTCACCAAATCTATACCTCAAACGACGGGCACTCTCTTCGTTAACACAATCCTTAAGTTGATGGATCTGGCTAGCAATTTCATGACGTGACCATAACATTCCTATCTTTTTTGCTGTCCTGCGGACAAAGTTGGCATCCACATCCCCATGATTGAATTTGCGCATGAATAAATCGATGCAATCCTCGATTTCTCGGACCCTGTTTCTCCACTCCTTCTCCTGCTCACCCAGGTTCTCCTCCATATTTGACATGTTGATAAGAAAGTTGTTGATGGCAGTCAGCTCATCTCTCAAGAACCTAATGTCAGAGTTGACACCTTTCAGAAGCCTGTATTCCTCTCCCAGCAAGGCAGATAGCTTGGCAAGGAGGGAACCCATCACCCCAGTGGCAGCACTAACTGCTGCTCCGTCCATCTCTCTCTCCCCCTTCTATTCACTAGCCGTCCTTGGTAATCCAGATGCAGATAGATTCGCCTTTGGGGAAAAGCAGCGATTGAGTTGGCATTGGCCGTCAGACTTGTTGGAGTACCACTAGTAGTGTAGTGGCACACCAAGAATCACTGGTCGCCGGAGATGGAGCAGAAGAGACGAGGAGAACTAGAGAAGTTACCTGTTAATTGCCGTCTCCTGGAGATGAGCTCCCTGATCTTAGCTGGGTACTTGCGAGTCGAGGATGGGGTGGAATGGAGAAAGCTGGGGGCAGGAGTGGACACGAGGGAACAAGGGGCGTTTCTGGCACGTTATTGACTTCTTGCCTTCTTGGGATCTTGGCAGCTACAAGGAAGAAGATTTGGGAATTTGGAATCGGTTGGTGTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0123300.1 | 12 | 9993926 | A | C |
| Osa12LNT0123300.1 | 12 | 9994313 | T | C |
| Osa12LNT0123300.1 | 12 | 9994510 | T | C |
| Osa12LNT0123300.1 | 12 | 9994586 | T | C |
| Osa12LNT0123300.1 | 12 | 9994597 | T | C |
| Osa12LNT0123300.1 | 12 | 9994637 | A | G |
| Osa12LNT0123300.1 | 12 | 9994980 | A | C |
| Osa12LNT0123300.1 | 12 | 9995328 | C | T |
| Osa12LNT0123300.1 | 12 | 9995368 | T | A |
| Osa12LNT0123300.1 | 12 | 9995384 | T | G |
| Osa12LNT0123300.1 | 12 | 9995845 | A | C |
| Osa12LNT0123300.1 | 12 | 9996156 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0123300.1 | osa-miR5815 | Translation | 4.0 | 15.82 | 1 | 24 |
| Osa12LNT0123300.1 | osa-miR5143b | Cleavage | 4.5 | 13.14 | 1 | 24 |
| Osa12LNT0123300.1 | osa-miR5821 | Cleavage | 4.0 | 16.859 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR164a | Cleavage | 3.5 | 12.482 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR164b | Cleavage | 3.5 | 12.482 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR167a-5p | Translation | 5.0 | 15.034 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR167b | Translation | 5.0 | 15.034 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR167c-5p | Translation | 5.0 | 15.034 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR164c | Cleavage | 2.5 | 12.482 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR164d | Cleavage | 3.5 | 12.482 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR164e | Cleavage | 3.5 | 12.482 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR164f | Cleavage | 3.5 | 12.482 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR1858a | Cleavage | 4.0 | 16.893 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR1858b | Cleavage | 4.0 | 16.893 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR2094-5p | Cleavage | 4.0 | 20.208 | 1 | 21 |
| Osa12LNT0123300.1 | osa-miR5143a | Cleavage | 4.5 | 13.14 | 1 | 24 |
| Osa12LNT0123300.1 | osa-miR5501 | Translation | 5.0 | 11.845 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0123300.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0123300.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0123300.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0123300.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0123300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0123300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0123300.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0123300.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0123300.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)