© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0124600.1
AAACTACACTCACCTTCCTATCTTTCTCTATTGACGATAGAAGAATCAACATATACCTCATCAATAAACAAGCGACTTAATTCTAGTCTATAGTAATCCAAATACAATCCTTTGTTATATCTAGCGATCTCTACAATCTACATTGTCTATGTATCCAACATAATTCGCACCTCACCATTACTTTTAGGATAAGTGATTTTGCTCTGATCTGCCTCTGTATTCGTGGGAACTTGCTGCTGCTGCTCTTTTATCTCCTTCCCTTTTCCCCAGAGGAAGGAATAGAGGCCAATGATTATCATAAATGCCCCTAGCAAGCTGCAAGCAAAGCATGTTATATATTATAAGACTTTCTATAGTATTATCCATATTCATATAGATGTAAATGAATCTAGACATATATGTGTATAGATTCATTAACATCTATATAAATGTGGGCAATGTTATAAAGTCTTATAATATGAAACGGATGGAGTAGTATATATAGTGCCTCTCATGTGGTAGCTAGTCCATGCTTTTGCCGGACTTGATACCGTACATATATAAAACAGTACGACCCTAAGACTGAATATACAGACATGCTGTCGCAGTATTAATTCTCACCTCCCGACAGAGATGTCGCTTCCAAGCAGCATCGAGTCAAGGACGACGGTGATGATCAGCGCAAGCGAGTTGAACATGGAGGGGTAGGTTGGCCCTCGCCGTGACACCGCCCACGTGATCAAGCAGAAGGTGGCAGCCGTGTTGAAAACCCCCGAATAGATGATGGTGATCAGCTGCAGATCCCAGTGGAGTGCCCATGCCGACCGGTCCCGGTCGACGGCGATCCCGATCACCACCGCCTGGATTGTCCCCATCAAGCATGCGAGCATCGTCGAGAAGTACTTAGATGGGAACTCCTTGTTCACTTTGGCCTGAACGATGAACCAGAAGGCGTAGCTGAGGCAACTGCCGCAAAGGAAGAGCGTCCCGATGAGCATGTTGTGGTGGGTAGGGAAGGTGGAGTCGTCGCTGCCGCCGATCGCCCGCAGCTGCGCCGGCTTCAGCAGGTGGGTAGGCCACAAATGCAGCAGCTTGCCCCTGTACAGGCTCACCACCATGGTGCCCACAACACAGATCACCGTGCCAATCACCTTTATCATGCCAGACCGCGTCTTCAGCTTCAGCTTCTCCAATCGGAAGATCGCTGCAATGATGAAGGTAACGACGGGGACCAAATTTAGGAAATTGACGGTGTATCCAGCATTGGTAGCGCGTAGGCCGTAGTAGTGTAGCCCCATAGCCAAAACAATTCCGAACAAAGCGTTGAAAAATATCCAGCCCAGTACCTTGTAGTTAACCTTTTTCATCATTTGCCTCTCGAACCAGAAGGCGAAGGGTAACATGGTGACGGTGCCAATGAGGTTGCGGTATGCGAGGAGGACGAAAGGTGCCATCCCACTATTGAATGATAGCTTCGCGAGGAGGAGGGCACCTATGGTGAATAGCTGGACCAGTACCATGCTCAATGGGAGCAGTAACCGCTCCGCCATCCCTGGCTTCGTCTTCGTGGTCATCGTCTCTGCCATCATGTTGGTACCCTTAGAGCTTTTTCAAGAGAGAAGATAAGTGTTCATTCCATTGTAGCCACCCCTTCTGATCACTCTCGCATGGTCTGCAACAACGTCAGCATCAGTTGGGAATAAAACTAATTGAGCGATTTGCAACAAGGTCATCAGCATCAGTGGGGAAAACCAATTGAGCAATTTTTCAGGATTAAGAACTGTAATCACTCGGGCCATATCCACACCAAAGATGATGAGGAGATGTCCACAGCGACAACTTCAGTTGAGCTTAAATCTACATGCCACCAATTCCTCAAATACTACTACTTCTAAGCCAGGGGCCTGAATTCAACTCCCTATGGAAATGGTGATGGCAAAGTGAGAACCAAGTTTGATATGATCAAAACAGAAAGAGGGCGATGGTAGGGATTGATAGATGATGGAAGCAAATATGAGTAGAGAATATAGCTCGCACTAGCCGCGCCGAATTGATGGAGAGTAGTTTGGCTAAGAGAGATTGAGGTTGGAGAAGAGAGGGGGTAATTGAAGCCTGGAGTGCAGAGTGTCGAGGAAAGGGATGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0124600.1 | 12 | 10999506 | C | T |
| Osa12LNT0124600.1 | 12 | 10999509 | C | T |
| Osa12LNT0124600.1 | 12 | 10999518 | T | A |
| Osa12LNT0124600.1 | 12 | 10999761 | G | A |
| Osa12LNT0124600.1 | 12 | 11000086 | T | C |
| Osa12LNT0124600.1 | 12 | 11000880 | C | T |
| Osa12LNT0124600.1 | 12 | 11002057 | T | C |
| Osa12LNT0124600.1 | 12 | 11002222 | T | C |
| Osa12LNT0124600.1 | 12 | 11002458 | G | C |
| Osa12LNT0124600.1 | 12 | 11002941 | A | C |
| Osa12LNT0124600.1 | 12 | 10999410 | A | G |
| Osa12LNT0124600.1 | 12 | 11003771 | G | A |
| Osa12LNT0124600.1 | 12 | 11003962 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0124600.1 | osa-miR5536 | Cleavage | 4.5 | 14.076 | 1 | 22 |
| Osa12LNT0124600.1 | osa-miR5832 | Cleavage | 2.0 | 19.951 | 1 | 21 |
| Osa12LNT0124600.1 | osa-miR1440b | Cleavage | 3.5 | 14.04 | 1 | 21 |
| Osa12LNT0124600.1 | osa-miR6255 | Cleavage | 5.0 | 7.126 | 1 | 22 |
| Osa12LNT0124600.1 | osa-miR529a | Cleavage | 5.0 | 12.27 | 1 | 20 |
| Osa12LNT0124600.1 | osa-miR1424 | Cleavage | 5.0 | 20.843 | 1 | 21 |
| Osa12LNT0124600.1 | osa-miR444d.3 | Translation | 4.5 | 16.373 | 1 | 21 |
| Osa12LNT0124600.1 | osa-miR1850.3 | Translation | 4.5 | 16.079 | 1 | 22 |
| Osa12LNT0124600.1 | osa-miR1871 | Translation | 5.0 | 24.738 | 1 | 24 |
| Osa12LNT0124600.1 | osa-miR2919 | Cleavage | 3.5 | 21.004 | 1 | 19 |
| Osa12LNT0124600.1 | osa-miR3979-3p | Cleavage | 4.0 | 24.796 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0124600.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0124600.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0124600.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0124600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0124600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0124600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0124600.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0124600.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0124600.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)