© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0125500.1
CGTAAGAATCCATGTATAGAATCTCTGTAAACAAATAAGCGAAGTATCAACAAAGTTCTGACATTTTTGGAGTTACAAAGTTCACCATTGTACAACATTACAGCTTGAAAAAGGGCTACAATGAAACATAAAACGGTAGAACAAAGCAATTCTTTTCATCTTTTCTACCTGTTGCTTCCAGGTGGTATCCTATCATGATCTGGAAAGCACCAAACTATACAATGGCGAACCAGGCGCCCACAAAAGGGTGTGAATTATTCGCTTTCATAGTCGTCTTCATCTCCGAACGAGAAGACCGAAGCGTCTGCAGCAATTGCCTTGAACTCGCTCATGCTGGAGTCAGCAGCCGCTGGGGGTGGTGGTGGTGCTGTGGTGGAGCTGCTCTTGCTGCTAACTCCACTTTTGAGAGGTGCAGCATCAGGTGTCCTTGCACTTCCTTGTTCGCTGGTTATTGATACTTTTTCAATTCTGGAAGCAGCAGCAGACGCCTCCTTTTGCACAGAGCTTGTTTCAGACGCTTTTGCAGCATTAGTAGTACCCTCAACGTTCCTAGAGACCTTCTCCCTTCTGCCCTTGGATGATCCATCTTCTGCTTCACTGTCAGAGAAGACGTCATCCTTATCATTCCTTGCAGATTCCTTGTTGGACACTTCTGCAGATGAAGCATTATTTCCTTTTGCAACAGTTCCAGTCGAGGAATCAGCTTCAGACTTCTGATCAGTAGATGCGGCAGCTGGTTTTGGTTTTGGTGGTTGTGAACCATCATAGTCTACCAGGACAACCTCAACCTGGAATCCAGGTGATGGTAATTTCCTCTTGTCAAAATCATCAAGATCAGTTGGATTCAAAGTCACCCTGTTCTCCATCATTGTTGTATTTAACCAGCAGTAGAAATCCCCCTGTCGATCATGAAACTGAATCTTGAAGTCACCAGCTACCTCTGTTAATCCAGGCTCTCCAGGCAACGCAAAAACCATGATCCCTTTCTTTGGTGCACTAAACCAGAAATCTTCTGGCATCAGCTCCTTTGTTCTAGGGTGCTTCTTAGTTGTGAAAAGAACACCATTGTGATTAGACACAGTGATTGATGGTCTAATCCAATAAGGGCATCTATGAAGGCGAAATCCCCTGAGCATGCACCTGCGTGGAGGCTGATTTTCACCATTGAAGTAAGTTAAGATGCGCTCAAAATATTTCACATATCTAATCTGACTTGGGAGAATAAGCCCTTTTCCATCTACACATCTTTTCTGATTGTAGTATTCAATGGACTCTTCCGCAGTTGGAAAGAACTTCAGGTATAGTAGCAGACTGGAGATCATCAATCCTGTCCTCGCCTTTCCAGCTTTGCAATGAACAACCACTACATTTTCTATATCTTCCTTCAACCAAGAGTAAGCACTATGGCAGAACGATATGACAAGTTGTATCGGAGGGCAATTGTGATCATCAAAAGGGAAGCATGCAACCTGAAACATGGCTACTAAATTTGACCACTATGTGCAATATGCAATTAAATCGATTATTACACACCATTTAAAATACTGATACAAATGAAGGAATATTCAATATACCACCGGATGAACTGCGGACATTAAAATTTTCGGCAAGTCTTTTTCTAGCCTTGATAAGCTTGAGTGCTAGACTAGTCACTTGGAACTTAGAAATAAAACAAGATTTTGGATGCCACCTAGCCTAGGTGACCTAGATTAACGATTACTCCATCCTAATCGTGTCCCACTCCTCTTCAAACTCTAATGGTTGCTGCCGAGGTGAATAACTGAACACGCAGCCAAGTCAAACATGGCAAACAATCTAGATAGCTCAGCTAAGCTATAGCTCATCTTAGCAAAGAACCAAGCGTACCCTTTGTTGTATTCCCATTTTTGGTGGTTCATACGTGTATCACATGGTATGGAAATGACAGAACAGAGGACCTAGACAAAATTATAAGCTTCCCATACCTTTCCCTCAAAAAGAGATGCATCATATAGCCTTTCCGAGCAAAGGTTGTACACCTTATACTTTCCCTTGTGGTGCATTTCAAAGAACCTGATGACTTCCTCCATGTGGTTGCGGTAGAAGCCCTCAAAATATCCAAAAAGCCCTGAGCTCAAATCTCCAGCAGGGAAACCCATAGCAATGATGTTCTCTGTAATATATGTCATATCTAAATCAAAGCCGCCTTCCTGATATCGTCTTTTATTCTGTGAGACCATGTGGCGAGCCTTGACTTGCACTGCCTTAACAGCATTCTTAGAGGAATCCACGATGCCTTTAGTAAAAGAGCCAAAAACGCCAGATTGTGCTGTTGTTGGGGTTGTGCTGCCTTCAGCACTCTCATCTTGCTGAGGACCTTTTGGAGACAAGCGCAACCCAAGGCCACTCGTGAGGCGAGAAAATGTGTTCTTCCCCGTTGGTGATTCTTGACCTGAAGAAGGCTGTGGTATTTTCAGGTTTTTTGCCCAGGAGGATAAGCCAGATGTTGAAAATATGGAGGATTGTGCCTCGCGTCCTGCAGCATCTTGTATTGGAACAGCATTTGGAACAGGTGCAGGTGAAGGGGCTACATGGACTGTACTGGCAAACTGGGTGGCAGAATCATTTGAAGTAGCCTGAGAAACAGGGTCAGGAGTTCTGACAGGAGGTGCAGTTGAATCCTGGCTGTCCACCGGAGTAGCAGGTGGTGGATGTGAATCAGAGGGCTTTACTTGCTGTTCTTCCATGATTAGCCAACAGATTTAACAAACCTCAGAGTTTTGAAGCGCGAGTAACATCAGGATGCAGCAGGACGACGGCGCCCCCTCCCCGCTCTGCTCGCCAGATGGAGATCGGCGCCTCCTCCCCTGATCTGCCGCGAGATGGCGCAAGGAGCGGAGGAGACGATACGGGAGATTTTCTTTCGGGCGGGTTGGGGGTGTTGGGGTTGGGGCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0125500.1 | 12 | 12321850 | T | C |
| Osa12LNT0125500.1 | 12 | 12322507 | C | T |
| Osa12LNT0125500.1 | 12 | 12322542 | T | C |
| Osa12LNT0125500.1 | 12 | 12322814 | G | C |
| Osa12LNT0125500.1 | 12 | 12325127 | T | C |
| Osa12LNT0125500.1 | 12 | 12326472 | T | C |
| Osa12LNT0125500.1 | 12 | 12327024 | T | C |
| Osa12LNT0125500.1 | 12 | 12327163 | T | C |
| Osa12LNT0125500.1 | 12 | 12327556 | G | A |
| Osa12LNT0125500.1 | 12 | 12328206 | C | T |
| Osa12LNT0125500.1 | 12 | 12329853 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0125500.1 | osa-miR396a-5p | Cleavage | 5.0 | 21.378 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR396b-5p | Cleavage | 5.0 | 21.378 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR396c-5p | Cleavage | 5.0 | 21.378 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR397b | Translation | 4.5 | 20.23 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR160f-3p | Cleavage | 4.5 | 15.169 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR530-5p | Cleavage | 4.5 | 17.982 | 1 | 20 |
| Osa12LNT0125500.1 | osa-miR444d.3 | Translation | 4.0 | 10.165 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR1854-5p | Cleavage | 4.0 | 11.879 | 1 | 21 |
| Osa12LNT0125500.1 | osa-miR1874-5p | Cleavage | 5.0 | 10.902 | 1 | 24 |
| Osa12LNT0125500.1 | osa-miR2865 | Cleavage | 5.0 | 23.742 | 1 | 22 |
| Osa12LNT0125500.1 | osa-miR2878-5p | Translation | 5.0 | 21.881 | 1 | 24 |
| Osa12LNT0125500.1 | osa-miR5145 | Cleavage | 5.0 | 24.209 | 1 | 24 |
| Osa12LNT0125500.1 | osa-miR5150-3p | Translation | 5.0 | 24.357 | 1 | 24 |
| Osa12LNT0125500.1 | osa-miR5523 | Cleavage | 4.0 | 20.188 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0125500.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0125500.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0125500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0125500.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0125500.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0125500.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0125500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0125500.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0125500.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)