© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0125600.1
CTAGAAATCTTATACAGTATGCATCACATATATTGTGCATTTACAAGGTGCTTATAGATACCATATCATAAACTGAAACATCTCAGTCAAAGATTCAATAATTATTTATTTTTCAGAAAAACTCTTCAGTCATAGAGCAATTACAAATCAGTCCTCGAGCTCTAGTAAAATCTTAAATATTATAAAACCTTAAGGACTAGAATGTAAGAATTCCATAAGTACACGTGTTAAACCAACTTCCTGCTGTAATTATAACGCCGCTCTTAATAGTTTCTAATTTACTGACTTTAGGTTCCATGTAATCACCAAAATGACATCAAAGAGGAAATTACTTTTTTCACCCCAAATTGATTAGGTGAAAAATGAGGTGGCAGCAAGTCCTTTTCCAAACCGACATGCAGGCAGCTGCATCACCATGCCCTCACAAATTACATACAAATATTAGCCAAGCTAGTAGACTAGCCATCATGTTGCTTTGGCTGGGAGACGACCTCGAGGAACAGCATTAGCAGCAGTTGCAACAGTAGTAGAGTAGTATGGCTCAGCTAAGAAGAGCAACAACAGCTGTAGTAGCAAGTAGCTTAGCTAGAGAGTTACTCCCTCCGTCCAAAAAAAATTACTCCCTCCGTTCCAAAAAAAGACAAACCCTGGATTTCCATGCCAACGTTTGATTGTCCGTCTTATATGAAAATTTTTTATAATTAGTATTTTTATTGTTGTTAGATGATAAAACATGATTAATACTTTATGCGCGTGACTTATCTTTTTAATTTTTTTCATAATTTTTTTAAATAAGACGGACGGTCAAACGTTGGACACGGAAATCAGGGTTTGTCTTTTTTTTGGAAGGAGGGAGTAGTTCATTCGAGAGAGGAGCAGCTCAGTGAAATCCAGCACAAACCAATACATCAATTAACCATAGCTGCATAGTATCCATAGTAAAAACAATCAGGAAGAGAGAGAGAGGGAGGTCAGAGGAGTAAAAGGAGAAGCAGGGTGTTCTGTTCTTGGATGAACAGGGGTTTCAGCTCTTGGAGAAGATGTTACCAAGGTTAGGAAGCAAGATAGAGCAGCAATAATCAAGCAAGAGGATCAGTCTCAAGAGGAGGAAGAGAATCACCAGTAGCAGATCAAGAAAGATGTCAGGAAGCAGTCAAGTATTACCGGTAGAGGAAGGGCCAAGGAGGAGAATCACCTTTAGATCCAGAAGAGCAGCAGTAGAAGAGAAGACTTGGATTTTTGAAGGAGGAGCTGAACCACATATTTTTCAATCACTGTAGAATCATCAGAGGTAACCAAAAATTAAAATAGGGAAGGAGAGTAGATCCTGCATTCATAGTAACAGCATTTGTTAGAGCTAGAGTTTCATACAGATATATGCACCATCCATACTGACCAAAACCTTAGAAATTCCAAATGAATATAAGTGACAAAAATTAGGAGGCTATAGTTTAAGATAAATGTATGTCTTTAAATCTTAATATAGACGTATATCAATTATAATATATGAAATCTTGATAGCATCAATAAGCATGTGTAGCTGTAATTCTTGTATAAATCAACTAGTGTTCATGATATAAATTATTTAGGAATAGAGCATGTATAGAAGAAACTGATCATGCATGAGAATTTGTAAGTTTTCATATTCTAGTCATGCAAACAGGGCATAACCTTGACATGTGCATATTCCTGGAAGGGTTAGGATCTGTGTCTATGAATCTGATTTCATTTAAAAGTAATGAAGCTCAACCCTGATTTAATAGAGAAAACATCATAAATTATTAATAGTTTGATTTGAAGGATAGCATGTGAAATTAGTAGGTTATGAATCTGGGTTTGCATATGTATCTAGTTCTTTACTACAAAATTCAGAAAAGACGTCATAGGATGAATCTGGATGTACATTTAAGCATGTATAGTGTTAAAGTAATAATAGTTGTACTAAATCGTAAAGACTTAACAGAACATGCAAGTTTCTTTACCAGATTATTATGTGCAGGAGAGTAAATGTTTAGAGCATAGTCTCATAATAAAACAAATGTAAGTAATATAATCTATCAATAACTCTAATCTAATAAATTATATAGAGATGAAATTCTGGACATATAGACTAGTAGTAAATTATTTAGAGAAACAAATTATCATTTATTAACTTCAAGATTCAAGTTTTAGGGATCTTCAGTCCAATAATTCAATATGTATAGATAGAAATTGCCATGATTATCAAAGTGTAGAACCATGTAAATTAATAAGACTTTAGTCAAAGATCTGATCCTGCTTGTATGTCACCAATTTTAGAAGATTCAGTTAATTCAACATGTATGCATATATAAGGACCAGTGATATTAGTGTGATTTTAATTTCAGTAATGCAATTCATAGGTTTATTCATGTCAGCATTCATTTATCATGAGCATATAGACATTATTCACCAAACCAAGTCAAACGTAAGAACCCTGAAATCAGTAAGCACAACCCTGAGTATAGAAAAAAAATCAAGTGACCACTAGGATCATTTATATACAACCAGCATCACTAGTCCACCGCTATCACAGACATCACCAAGGAGAGATAAACACTAGCATAGAGCAGAAGTTGAAGAGATTGAGGATAATACTAACTAGGGCAGTAGAGGAGAAAAGGGAAGATGAGCTATATAGAGAGATTTAGAGAGGGAAACAAGGGAAGAGAGGATTGAAGGAAGGGGAGAGGAGGAAGAAGCGGCGGCGGCGGCACCTTGCCGGCCAGCCAGGCAGAGGCGGCGGCGACACACCCTACAATTGGGGGCGCAGCCCTTGTGCGCCACAGCGCCAGGGAGAGAAGAGAGCGAGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0125600.1 | 12 | 12400845 | C | T |
| Osa12LNT0125600.1 | 12 | 12400851 | A | G |
| Osa12LNT0125600.1 | 12 | 12400782 | C | A |
| Osa12LNT0125600.1 | 12 | 12400394 | C | A |
| Osa12LNT0125600.1 | 12 | 12400892 | A | G |
| Osa12LNT0125600.1 | 12 | 12401025 | C | G |
| Osa12LNT0125600.1 | 12 | 12401339 | A | G |
| Osa12LNT0125600.1 | 12 | 12402944 | G | A |
| Osa12LNT0125600.1 | 12 | 12400830 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0125600.1 | osa-miR5537 | Cleavage | 5.0 | 12.135 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR5799 | Cleavage | 2.0 | 10.646 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR5815 | Cleavage | 3.5 | 9.658 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR156c-3p | Cleavage | 3.0 | 23.476 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156c-3p | Cleavage | 4.5 | 7.56 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156f-3p | Cleavage | 3.5 | 23.476 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156f-3p | Cleavage | 5.0 | 7.56 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156g-3p | Cleavage | 3.0 | 23.476 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156g-3p | Cleavage | 4.5 | 7.56 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156h-3p | Cleavage | 3.5 | 23.476 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156h-3p | Cleavage | 5.0 | 7.56 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156l-3p | Cleavage | 3.5 | 23.476 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR156l-3p | Cleavage | 5.0 | 7.56 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR812b | Cleavage | 1.5 | 10.624 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR812c | Cleavage | 1.5 | 10.624 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR812d | Cleavage | 1.5 | 10.624 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR812e | Cleavage | 1.5 | 10.624 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR1435 | Cleavage | 4.5 | 11.299 | 1 | 20 |
| Osa12LNT0125600.1 | osa-miR1439 | Cleavage | 1.0 | 7.011 | 1 | 21 |
| Osa12LNT0125600.1 | osa-miR1857-5p | Cleavage | 5.0 | 13.207 | 1 | 21 |
| Osa12LNT0125600.1 | osa-miR1857-5p | Cleavage | 4.5 | 6.483 | 1 | 21 |
| Osa12LNT0125600.1 | osa-miR1859 | Cleavage | 4.5 | 13.871 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR2095-5p | Cleavage | 4.5 | 8.481 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR2870 | Cleavage | 2.5 | 17.145 | 1 | 21 |
| Osa12LNT0125600.1 | osa-miR2922 | Cleavage | 4.5 | 9.358 | 1 | 20 |
| Osa12LNT0125600.1 | osa-miR812o-5p | Cleavage | 1.0 | 14.341 | 1 | 21 |
| Osa12LNT0125600.1 | osa-miR5340 | Cleavage | 4.0 | 15.643 | 1 | 23 |
| Osa12LNT0125600.1 | osa-miR5486 | Cleavage | 4.5 | 15.093 | 1 | 21 |
| Osa12LNT0125600.1 | osa-miR812p | Cleavage | 4.0 | 10.624 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR812s | Cleavage | 0.0 | 10.646 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR812a | Cleavage | 1.5 | 10.624 | 1 | 22 |
| Osa12LNT0125600.1 | osa-miR812g | Cleavage | 3.5 | 10.646 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR812h | Cleavage | 3.5 | 10.646 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR812i | Cleavage | 3.5 | 10.646 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR812j | Cleavage | 3.5 | 10.646 | 1 | 24 |
| Osa12LNT0125600.1 | osa-miR1439 | Cleavage | 4.0 | 8.94 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0125600.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0125600.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0125600.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0125600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0125600.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0125600.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0125600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0125600.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0125600.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)