© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0126000.1
CACGATAACTTGGTTTACCTTAAAAAATCCTTTACAATTTTGTTCCATTGGCAAAGGACTAAAATGCCAGAAAATACCCGTTAGGAATTATCAAGCTCAAATGACATAAGTCCACACTACTGTAGTACATTCTGTACTTCAAATTTTATTTGTGTTTAATGATCCCTTCCTCCTGGCCGGGTTTTCCAAGAGAGAAGACGACTATTTAAGCCGTCTAAATCTAATCCCTCTCAGTTTTAGCCTGAGCTCCTCTGCAATCTTGACAATAACGAAGAATATCATCCTGTATGTCACCATCATCCCAAACAGGATAGCAAGGTTTACCCACTTTGAATAGCCCATCTCCACTTGCAGCCTTTCCTTGAGAACCTGAAGACCACTGATAGTGGCATTGGCCTCGATGAGCTGATCACTTGGAAAAGACAGCCCTATGAACTCATTCTTGTAAAACCCCTGCACCGCATACTTGTGGAAGGAGATGTAGTAGCAAGGGTACTTCCACACCGGCTTCGGGAGCTCGTTCGGGAGGCGGAAGAAGCCACCATTGAGCATCATCATGCCCTGTATCCCGGCACCGATGATGATTCCCATGAGGAAGTCTGGGACGATGACTGCGATGATCATCATCATGCTCTCTACCAGCAGCGTGCACATGCAGAGTGTGGCGACGAAGTATGCGAAGTGTTCCGCACCTCGGGTCAGCCCTGTGAGGTAATACATCATTGCTCCGGGGATCACAGCGATGACGGCAAGGTAAGGGGTGGCTGAGAGGGTGTTTGAGATTACAAATTCCATGACTCCGTAATGGCCGCTCAATCTCTCCCTTCTGAATAACTTTATGTCCTCTACGAAAGAAGGGAATCCTCCAATTGCCATGAAAGTTACAAGCGCGGTTGTATACATTATTACTTCACATCTACTCTGGATAGAACTGTAGCTGTAACCAACTTGGTAGAAGATGGTGCCGAGGCAAATGCCAATGCCCAAATAAATGCCCAAACGCATCCAGTAGTAGCCTATGTCCCTGTGCATATTTAGGAAGGATCTTCTTGTTAGCACAAGGAGCTTTGTCAAGAAGCTGGCTTGCTCTTTCCTTCTAAATGGAGTTCCACCCATCCCTTTCATCTCAACTATCTCATTGGCTGTTTTCTCTGAATAAGTGGAGTGGTATGCATTTGTTAGAATATTTGTTGCTTCAGCTGCTGTTTTTCTGTTAGCCTTGGAGCTTTCCATAGTTCCCTCATCAAAGTCCTTGTTGATTGTTCTCAGGAAGTGGTCGGATGGGTTCCTCAGGTGTGGGCATGGAAAACCACTTTGGGTAAAAAACTGAAATAGATGAATATAGATGTGCAATTTCAAGAGCAATTAAAGAGATTGTGGTTATTAGTTACAAACATAGTTGTTAGGCTGACATATTCTCCCTCTAGTCGCACTGAATGGAAAATACATTTCGGACACTGATCGAAGTCCAACTTTGCTAAATGCATATGTTTTCTTATTTACGAATACAACGGATTCTAGTTTCTTTTGAAGAGATTAAGAATAAAAGGAAAAGACTATAATGTCCATCATTAAATGAGGGGTAGTTAATGAGTGGAGCGTGTTTATGTGTAAAATCGGGTGAAAATTAAATGAGGGGTGGTTGGATGGAAAAGTAGTACCTAAAATCTAAAATCTTTGTGAATAAAATTTTAATCAAAAGTCAAAATTCCAGTGAAAATAGATAGCATACAAAAAGAGTGTCAATTAATTACCTCAGTAGCATTAGAAACTGTCCCAAAGAATACCATCCTCCCATAGGCTAGCAATAAGAGACCATGGAAGAGGTCAAAGACGTCGCCACTGGGCTGGTGCACAGCGGCAATGACAGTCATCCCTTCCCTGGCAGCGACCCGGGTGATGTGGCTCATGACGTGGTAGGAGGCGGCGCTATCCAGCCCGCTGGTGGGCTCGTCGAGGAAAAGCAGCCGCGGCCGTGTCAGCATCTCAATGCAGATGCTCATCCGCTTCCGCTGCCCGCCGCTGATGCCCTTGGTGATACGGCCGCCGATGCGCGTGTCCATGGTGTCGCTAAGCCCCATCTCCCGGATTACACGCTCCGCGTGGGCGCGCTTCTCTGACGCCAGCATCGTGTCAGGTAGCTGCAGGTGAGCCGAGTAGTAGACGGCTTCTCTCACCGATAGAGTCGACATGAGCACGTTGTCTTGGGTTACATATGCCGAGGTTCCGAAGGCAAGCTTTTCCTGCCGGCCATTTATTAAAATCACACCGGTTTGATTCATTTCTTGTCCTAACCGTCCTGCGAGAGTGTCAAGAAGCGTCGTCTTCCCGCACCCCGACGGCCCCATGATCGCCAGAACCTCCCCCGGCCGCGCGTGCCCGGTGATCCCGTCGAGGATCCTCGCCGGCGGCGAGCCGCGAGTGCGGCCGGGCACCGTCACGCGCACGTCCTCCCACGTCAGGAACACCGCGGGGTCGTCGACGACGTCCGCTGCCGCCCGTGGAAGCGAAACTGCCTGCGCCGCCGGCAGCGGCACCTCGACGCCGTCGAACGTCCCCACTCCGCCGCCGGCCGACGGCGCCCATCTGTCATCGACACGTCGTCTCCTCGTCCACGGGAAGACGGCGGCGAAGAACGACGAGGTCCAACCGGTGACACCTCCGTCCGCCCGGGCGTCCGGCGTGGCGCCGCCGCCCCAGCCCCAGCGCCAGAGCGGCCGCGACGGACTTGGCGTCGGCGCCCACCGTGGCAGTGGCGACGTGGCCGCCATGATCGATAACGAGCTAGGCGTGCTTGCTTCTTTTGGTGCTACGACTCGAGCTGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0126000.1 | 12 | 12569287 | T | A |
| Osa12LNT0126000.1 | 12 | 12569540 | G | C |
| Osa12LNT0126000.1 | 12 | 12569733 | A | C |
| Osa12LNT0126000.1 | 12 | 12570456 | G | A |
| Osa12LNT0126000.1 | 12 | 12570843 | A | G |
| Osa12LNT0126000.1 | 12 | 12571396 | A | G |
| Osa12LNT0126000.1 | 12 | 12571412 | T | C |
| Osa12LNT0126000.1 | 12 | 12573294 | T | G |
| Osa12LNT0126000.1 | 12 | 12573502 | C | T |
| Osa12LNT0126000.1 | 12 | 12570206 | T | A |
| Osa12LNT0126000.1 | 12 | 12573560 | T | G |
| Osa12LNT0126000.1 | 12 | 12573576 | G | C |
| Osa12LNT0126000.1 | 12 | 12573709 | T | C |
| Osa12LNT0126000.1 | 12 | 12573780 | C | T |
| Osa12LNT0126000.1 | 12 | 12573897 | A | G |
| Osa12LNT0126000.1 | 12 | 12574138 | T | C |
| Osa12LNT0126000.1 | 12 | 12574342 | C | T |
| Osa12LNT0126000.1 | 12 | 12574913 | T | C |
| Osa12LNT0126000.1 | 12 | 12575551 | A | G |
| Osa12LNT0126000.1 | 12 | 12575795 | T | C |
| Osa12LNT0126000.1 | 12 | 12575872 | A | T |
| Osa12LNT0126000.1 | 12 | 12576138 | T | A |
| Osa12LNT0126000.1 | 12 | 12576142 | T | A |
| Osa12LNT0126000.1 | 12 | 12576248 | A | G |
| Osa12LNT0126000.1 | 12 | 12576266 | A | T |
| Osa12LNT0126000.1 | 12 | 12576808 | G | A |
| Osa12LNT0126000.1 | 12 | 12576953 | T | G |
| Osa12LNT0126000.1 | 12 | 12578213 | T | C |
| Osa12LNT0126000.1 | 12 | 12578229 | T | C |
| Osa12LNT0126000.1 | 12 | 12578536 | T | C |
| Osa12LNT0126000.1 | 12 | 12578638 | G | A |
| Osa12LNT0126000.1 | 12 | 12578956 | A | G |
| Osa12LNT0126000.1 | 12 | 12579075 | C | T |
| Osa12LNT0126000.1 | 12 | 12579472 | G | A |
| Osa12LNT0126000.1 | 12 | 12579534 | T | C |
| Osa12LNT0126000.1 | 12 | 12579619 | C | T |
| Osa12LNT0126000.1 | 12 | 12579624 | T | C |
| Osa12LNT0126000.1 | 12 | 12579646 | T | C |
| Osa12LNT0126000.1 | 12 | 12579693 | A | C |
| Osa12LNT0126000.1 | 12 | 12580519 | T | G |
| Osa12LNT0126000.1 | 12 | 12580617 | A | C |
| Osa12LNT0126000.1 | 12 | 12581138 | G | A |
| Osa12LNT0126000.1 | 12 | 12581432 | G | A |
| Osa12LNT0126000.1 | 12 | 12581433 | C | G |
| Osa12LNT0126000.1 | 12 | 12581510 | G | A |
| Osa12LNT0126000.1 | 12 | 12581797 | A | G |
| Osa12LNT0126000.1 | 12 | 12581877 | T | C |
| Osa12LNT0126000.1 | 12 | 12582104 | C | T |
| Osa12LNT0126000.1 | 12 | 12582303 | T | C |
| Osa12LNT0126000.1 | 12 | 12582400 | T | G |
| Osa12LNT0126000.1 | 12 | 12583219 | T | C |
| Osa12LNT0126000.1 | 12 | 12583672 | T | C |
| Osa12LNT0126000.1 | 12 | 12583707 | A | G |
| Osa12LNT0126000.1 | 12 | 12583722 | G | A |
| Osa12LNT0126000.1 | 12 | 12583847 | A | G |
| Osa12LNT0126000.1 | 12 | 12583979 | G | T |
| Osa12LNT0126000.1 | 12 | 12584216 | A | G |
| Osa12LNT0126000.1 | 12 | 12584391 | T | C |
| Osa12LNT0126000.1 | 12 | 12585205 | T | C |
| Osa12LNT0126000.1 | 12 | 12586623 | A | G |
| Osa12LNT0126000.1 | 12 | 12586648 | T | C |
| Osa12LNT0126000.1 | 12 | 12586225 | C | T |
| Osa12LNT0126000.1 | 12 | 12579039 | T | C |
| Osa12LNT0126000.1 | 12 | 12584883 | T | C |
| Osa12LNT0126000.1 | 12 | 12585232 | G | A |
| Osa12LNT0126000.1 | 12 | 12586125 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0126000.1 | osa-miR5530 | Translation | 4.5 | 20.395 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR169f.2 | Cleavage | 4.0 | 12.548 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR169f.2 | Translation | 5.0 | 19.518 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR444b.2 | Cleavage | 4.0 | 22.139 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR444c.2 | Cleavage | 4.0 | 22.139 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR444d.3 | Cleavage | 4.5 | 22.902 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR444f | Cleavage | 5.0 | 22.139 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR3981-5p | Translation | 4.0 | 15.822 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR5144-5p | Cleavage | 5.0 | 7.508 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR5496 | Cleavage | 4.5 | 12.37 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR5524 | Cleavage | 5.0 | 16.802 | 1 | 21 |
| Osa12LNT0126000.1 | osa-miR5144-5p | Cleavage | 4.5 | 22.244 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0126000.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0126000.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0126000.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126000.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126000.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126000.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126000.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)