© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0126100.1
CGCGTGCCCTCCCCGCTCCCGTCTCGCCCTCCCCTCCCTCTCCCTCTCCCGCCGAAGCCGCCGAGCGCCACCTCCGCCTCCCCCTCGCGCCGCCGCCTCCACCTCCGTTGCCGTCGCGTCGCCGCCGCCTCCGCCTCTACCTCCCCCTCGCGCCGCCAGCTCCGCCTCTGCCTCCTCTTCCTTCCCCTCTGCCTCGCGTGGCCGTCGCCGAGTGCGCCACCTCTGGCTCACGCCGCCGCTGCCGTCGTCGCTGTAGAGGAGGCGGATCCGACCTCCATGTGTTTGGGGGACGCGGATCTGACTGACGCAACGTCGTCATCCGCTGTCGTCGCCATCGCCGAGCGTCACCGCTGCATCCTCCGCCACACCTCCGTCCTTCACCGCCAAAGACCGCTATGAGCGGTCGACCTGGGGTGGAGGCGTGGAGCCGGCCGCCATCGCCGCAACTTCATGGCATAGGGGACGGTTGTCCGTCGATTTGAGGAGTGAGAGGCGGCAACAGCAATAAAGAGGGGAGAGGCCTGCCGGCGGCTGTATGGTGGAGAAGCGCCGCCGCAGCCCGCATCCCCTCCTCTCGCCCCTCCCTCTCCCACCCGGGCGATTCGCAAGCCGCCGCTGCCACCGCTCTCGACCGCCATCGCTGCCGTCTCATGGGCTCCAGGAACCGCCGGCGGGGGTGATCTTGACCTCGACCTCAGCCTTGGCTGCTTCAATGGTTGCATGGGGATAAGTGGAGCTCCGTCCTGGAAGGGTGGAGGCGGGAGATGCTCTGACCATCGGCGGCTGGCATCAGCATCAGATCCAGGCTGCGGTGGCGCGGATCGAACGTAGAGGCGTGATCTGATGACGGTGGTGGAGTTGCAACCAAGGTCGATGGGGATGTCGAGGGCGTTGCTGATGAAGAAGCACCCCAGTTAATGATATGGCTCGCTTCTCTGGCTCGAGGGCGTTGCGGATGAAGAAGCCCCATGCTCTGGCTCAGGCTCCGCTACGGGGTTACCATACCGTAGATTATATTGTCAAGATGCACAGGACATAATGAATAAGTTCAGCACGCCGCAGACACGTCGTGGTCAATTCCTCATCGGAAGTATTGCTTGGTGCTTGTGTATTTTTTCCGCATAGAAATAAGATGGGATGGATTTTTTTTCTCCACAGATTATTTTATATGTTTCTAAGAATAGGAATATGAAGTGGAAAATATGGCATGTGTTCTGTATGCTAATAATCTAATAGAGTGGATCAGGTTGGTTCGAGTTTGTTTGCAAGGCAAACCAACATTACCTACATAGATGGCACCGTGATAATCATGGAATTGTTTCTTCTCCTTTTTACATGATCCTGTAAATGAAAGGAAGGTACTACTGATTTATTGGATGATCTTTCGTGACTTGCGGCTAAAATGATGGTGTAGTTTTAATCTCTGTATTCCCGTTTCATATCATAGAAAAAAAGAACTAATGTGGTTAAAAGGTGAGATATTGTATTTTTGTTGAATGTTTATAATCTCTAATAGGTTTATTTTTCTGGTTTTGAGGCTTGTGGGCCTAATATACCTTGAGACAGTGGCCCATGGCTGATAACCGGAAATGAGTCATGACTTACTGCTGGGACTTATCGAAGATCCTGTTTTGAGATAAATATGATTTCATTTCAGGTGGAAGTTCTGTTATTCTAAAGGAATCAGCATCTGCCTTCTAGAGGTGAAAAATGTATAGTCCTAATTACTAAGGCATTGTTTGATGTCTGCCCTTCTAGAGGTGGAATGTACAATCCTGGTTGCTAGGGCATAGGATGATGTTTCTTTTATTTGGCTTGTCCTGTGTTTATCTGGTTAAATGTCAAGAAATGTGCCATGTGCTATTGTCTCCCATGAAACATTGAAAGAAGAAGGGTTTATAAGGCGGCCCTATACATTAGGTCTTTAGATGTAGTATCCTTTCTTTGACAAGCTCTGATGGCCTACAAAAACCGGCTCTCACACCATTAGGTAATGTTATGTTTCCATTAATTTTACTGGGATATTGCATTACTTGGGATAATCACATGCATTTCCATGGCAATTTAAGGTCTAGCAAGAAAATAGTTTACTAAACGGACCAAGATAGAATTTCAAGTCTTACGAGTAAAAGTTGGGATGATCTGGTTTAATGCTATAATTTGTATGTACCAAATAATTCCGTAGACATCCTGAATACCTAAGTACTTTAAACATTTTCGTATGAAGAGTTGTTAGGTCTGCTAGCAGCAGTACGCTATTACTTCAAGTTAATCACTGCATGAATTTCTGTTTATGGGAATCTTGAGATTTACAATACATTTGAATGCTTACATTATATGTAGCTAAATAAACCCAACTAATGGAGGGTCAGTTCATTTATTTATCATGCAAGATTGTTAGTTTAACTATGTCAGATTTGCATAGGGTTCAGGGTTTAGGGACCTCATTAATAACCTCTACCACCATCTGAACCTAAAGATTTTGCATGCTCTGGTTGCAGCTTCAACCATTCCTTGGGTTTGCTTCTTATAATTGATGTATAATTTATTTTTGATTTGGTATTATTTTCTATAGTGACAACCTGTACTAATTACAGATCTAATATTGTGCCTCAACCTCACATGTTGAATATGTTGGCTTACGTCAGTTAGACCTCTACGTAGAAAGCATCAATGGTTGTGAGGCCTACTGATTTCTCTCTCACTCTAAGTCCGAGAAAAATATTGTCGTGTTGATGCTACTTCCAAATTTGAGCATACTAAGATGCACTGATGAACATGGTACTGTTACATTACTCTAAGATGTGATTTCAGGCTCATGGTTCTTCGTATGGTATAAGTTGCAGGTATTGAAGTGCTGGGCTGGAAATTCTCACAAATGCTAGGACACCCAGCAGCACTGCCACAACAAGTCAGCAATCAAAGTCTCCATGCGCATGTGCATGCTGGTAACCTCTACCACTATGTGCATACATAATAAATTAAATTTACTTTTGCCACTTGAAACCTATAAACACAGGCAACTATTTTTTTTCTTTTTCATTTCCAAAGGTTTGTTTCAGTGTTAACCTTGGTATTTTTTTTCCTATCAAACTATCCAAGCTGAATGAGTGCAAGGATATTTTTGAGGCTTTGTACAAATTATTTATGATCTACGCACCTACTTGAAGCCACATGTTGAAATTAATATATTGATGTTGTATCATCACAGAGGCGGTCTTTCTTAGTCTTCAATATTTTCTTAGAGCTAAACGGTTATATTTTTTTTGGTGTCTACTTAGCAACAATGCCATCTCTTCAGTTATTGCAACTGACAGAGCATGGACACAACCTTTTGTCTTTGAGAAGTTGTTTCTGGTGTATTACTTGCGGGTGGAACTTTAGCGTATGCTCAGTCAGCTCGGCGCCAAAAATGTCAGGAAGAATATTCTCATAGTGATGCAAATACATAGACCACGAGTAATCAGATCATTTGTCAAAATGGTGTTGATGGTAAATTGGTAAAATCAAGGAAAAAGAAAGATGGCTCCTCCCATTGAATTCAAGTGTTGAAATATGTGATTCAAGTATTCTGATTGAATACTTAAATTCAAGTATTCAAAGGTCTTACCAACATGTTATCTGAAAGAGCACTGAATCTAAACCATAGAACTTTATCATTTGAAGGTTGTTCAAGTTACTATGAGACCTGCCAAGCAATCTGCGCTGGTGCTACAAGATTGCATATCCACATGTTTATGTAGTTCACATTTGTTTCCCAAGTGGTGAAGATATTCAAATCTATATGTCGTTACTACACAGAATTGTTCAAGTCAGTAGTGTAAAACTAGCTAATTATATTCAACCAGCTTCAATTTTCTTACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0126100.1 | 12 | 12836639 | T | C |
| Osa12LNT0126100.1 | 12 | 12835468 | T | A |
| Osa12LNT0126100.1 | 12 | 12836516 | C | T |
| Osa12LNT0126100.1 | 12 | 12834077 | A | G |
| Osa12LNT0126100.1 | 12 | 12834567 | A | G |
| Osa12LNT0126100.1 | 12 | 12834623 | T | C |
| Osa12LNT0126100.1 | 12 | 12834859 | C | G |
| Osa12LNT0126100.1 | 12 | 12835616 | C | G |
| Osa12LNT0126100.1 | 12 | 12836285 | C | T |
| Osa12LNT0126100.1 | 12 | 12837475 | G | T |
| Osa12LNT0126100.1 | 12 | 12837577 | T | G |
| Osa12LNT0126100.1 | 12 | 12837684 | T | C |
| Osa12LNT0126100.1 | 12 | 12838086 | T | G |
| Osa12LNT0126100.1 | 12 | 12838199 | C | T |
| Osa12LNT0126100.1 | 12 | 12838399 | A | G |
| Osa12LNT0126100.1 | 12 | 12838698 | T | C |
| Osa12LNT0126100.1 | 12 | 12839011 | A | G |
| Osa12LNT0126100.1 | 12 | 12835667 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0126100.1 | osa-miR5807 | Translation | 4.5 | 10.088 | 1 | 24 |
| Osa12LNT0126100.1 | osa-miR5812 | Cleavage | 4.5 | 16.556 | 1 | 24 |
| Osa12LNT0126100.1 | osa-miR5821 | Translation | 5.0 | 22.059 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR399k | Cleavage | 4.5 | 15.936 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR528-5p | Translation | 4.0 | 11.589 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR528-5p | Translation | 4.5 | 10.459 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR1426 | Translation | 5.0 | 13.644 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR1851 | Translation | 5.0 | 18.09 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR1855 | Cleavage | 5.0 | 18.088 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR1861n | Cleavage | 4.0 | 16.073 | 1 | 22 |
| Osa12LNT0126100.1 | osa-miR1866-3p | Translation | 5.0 | 19.047 | 1 | 22 |
| Osa12LNT0126100.1 | osa-miR1874-3p | Cleavage | 4.5 | 15.279 | 1 | 24 |
| Osa12LNT0126100.1 | osa-miR2093-5p | Cleavage | 4.0 | 13.278 | 1 | 20 |
| Osa12LNT0126100.1 | osa-miR2122 | Cleavage | 4.0 | 15.147 | 1 | 22 |
| Osa12LNT0126100.1 | osa-miR2920 | Cleavage | 4.5 | 10.986 | 1 | 23 |
| Osa12LNT0126100.1 | osa-miR5490 | Translation | 4.0 | 13.556 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR5490 | Cleavage | 5.0 | 12.302 | 1 | 21 |
| Osa12LNT0126100.1 | osa-miR5492 | Translation | 5.0 | 10.425 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0126100.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0126100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126100.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0126100.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0126100.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126100.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126100.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)