© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0127100.1
CTGCTCCATTCCTTTTGGTGTATCATCATCCGAGATCAATTTCTTCTGGGGTTCCTACTATACCAAAATATTACAACAACGAGATGGGGTCCCACCTCAGGTCATCTTGCTTTGGATTTGCCTATGAACATGTACAAGGAACTCTACATAAGAAAGGCCACCAGGTGCCTTGTCTTCGACCAATAGTGAGCGGAAGAAATCTCCAGATGGGTCCCCATGTTTGCATAGTCTCAATCTCAAATAGGAGCATCTCTGTCGCCTTATTTCATTCACCACTTCATTTACTTTCCTGGAAAGTTCGTTATCATATTGCTCCAATACCAACTGATTTGGTACTCCAGCCAAAGATGAAACACCAAATATTTGCTCAAGGGTGGCAGGGTTTACTGCATTTCCGACATAAACAAAACCATCCTCACCATTTTCCAACAAATAAATTCCAAAATCAAGCGTATTCTCACTATTGAGTGTAAGGGGGTTTGGTATAAGGGAATCATCATCACTCCTTGACGCAAGATCATGGAGGGCAATCATCCTAGGGAACACCAATGGAATGGCTAGTAACACAGAAATTGAAGAGACAGTTGACACCCAATAGGACCGATCATCCAATCTCCCATCAGTCCTCAATCCAACACTTTTAATTAATGCTAGCGTATACAAAGGCAGGAGCTTTAGAGCCTCAGGAAGAATCAATTGTCCCGAAGAACTTACAGATGCACAATGTTTTCGGTAAGACTGGAGTATATTGATGCATGTGCTCGTCACTTGGTCCCTAACTTGGGATAGAGGTGTTGATGGAATGGCATTTGCGGCTTGCTTCACAACATAGGTAAACTGTGTTTCCAGATCAGCATATCGGAAAAGGTTGCTGAGCACATTTGTGCATGAAAGTGAGAGGTTTATGACCCGTATCCTTCTTTGTCCATATACCGTCGTGTAAAGAAGTGCACACTGGAAAGCACATTCTGAATTCTCCTGCAATTTGTCATCATGCTTAAAGGTGACCATTATGGTTTTGTCCGAGTCAATCGCAGGGAGATCAATATCAGTAGGAACACGCCGGCAGAAGTTGCCAGAATAGTCTTGAACTTGAAGTCCTTGACTGCACCTCACACGCATGACAGCCTCAAATCCCTGGGGTCTACTGATATTCCATCTGAGATCATTGAACAGCTTGGCTGGATCAGAAAGGGCAGAAAATGGATAATAATGGTACACCCGGCCACCAGTGGTACTAGGAACAACTGATATAGAAGAAATATCTACATATGATTGTGTAGTAAGGAACACATCCACACAAACTTGATACTCTGCAAATTCTAGTGCCATCGTCTTCAGAGTCTTATCAACAGGCTGCAGGAGCTTATGTGCTTCCTTATCTCCAGTGGAAATATTTGATCTACCTTCAGCTTCCCTGGCAGATAATGAACCAATTCCAACTGATGGTAGTACTGACTGGAACACGAGTAGTTTTCCACCAGTAGACTTCATAGCAAGGAAACTGGCCTTCATAGCTGCCCCAAATGCTGAATCAGCGACCCTATTGTTCTCGAACATGTTAGGGATGCTCTCCAGTAATTGCTCCAAATTCTCACGGCACTCAGAAATCAGGAGAATCAGGTCAGTCTGAAGTGGAGTGTACACATCTTGGATGTCTGGAACAATAAGCATCAAAGGCTGTTGCTGATCACGTTTAAGACTGTAGAAATGAATAGCGGAATCAAATGTGGCAATCCCAACCATTGTTCGAGGACCTTCAGGAAGGTCCGAAAGAGCCTGGGAAATTGCACTGCAAGCTGCAGCTGTTGCACCAGTCTGTATGGCATTCATGGAGACATCAATGAGGAAAAAATACACAGCTGGCATTGGATCACGAACCAGAAATTCCTTGGAGGCAATGAATTCAACTGTTCCCCTACATAATTCAGGCCTGTCATCAGCATCGCGTCGCCTACCATCAGGACCTAAGTTGCACAAGTACTCCCTTGGAGTATCATTGCTAAACCCACATAAGTTACAGACAAAATGCTTCCCTTGATCAATGAATCGCATGAAAGGATTTATGTATGCTTTGCAGCGTGAACACCTAATAGGTCCCATCCCTCCGAAGTCCACAAGCTGGATAGGCTCCTCGGAAGGATGAGGAAGTGCAAAAGGTTGCACCATCAAGGCCAATGGCATTGCTGATGTTGTCAAGATATCTCCTGTACATGGTATCTGATTTAAGGTGCACCGCATCAAACGTGGATTGCAGTTACCTGTATCCTTGACAATAAATTCACTGGACGCAGCCGGTGGAACAGCTGCTTGGCCACCTTGCCGGGTCTCAAAAATGACAACTGACGTCTCAGGCATTGGACGTGGTATTTGATTAGGATCAATTTTGGATGGGGTAGAGACCTGGGCTCCAGCATGTGGAGAATATGGCATTGAGGGTGTGGACGGCATCCCTTGTCCTAGAGCATTGGGCAGCATGCCGCCAGGCATTAGCTGCATACCAGCAGACATAGCTCCTGGTCGTGCTTGCCCTTGCCAACCCGGAGGCCTGAATGGCGGAGCATTCCCTGGCACCCCCATGAACGGAGGTGGCTGGGACGACGGCGCAGCCTGAGCCCCAAAAGGCGGAGGCTGTGTTCCTGGCCACTGTGGTGCTCCACCAAACGGAACCTGCTGCGATGGCGCCGGTGGCCCTCCATACGGCGTCCTCAACCCACCAGTGGGCGCCGGCTGCGGCGCTGCCCCAGGTGGCCCGCCGAATGGAGGTGGCTGTGCCGCTGCAAACAGAGCCCCACCCAGCGGAGCCGATTGACCTGCTGCTGCTGCAGACGGAGGCCTGCCAAATGGGGGAGGCTGCGCCGCCGCCACAGGCGGTCCACCGAAAGGAGGAGGCTGCGACGCCACCGCCGCGGGCGGGCCACCGAATGGCAGCGGACCCTGCGACATCGCCGAGGGCGGCCCTCCGAAGGGCGTCCGCTGCGCCTGCGCAGGCGGGGCACCGGACGGCGGACCACCGAAGGCAGGCCGCTGCTGCTGCTGCTGCTGCTGCAGCGGCTGCGAAGGCATCACTCCGGGCGGGCCACCGAAGGGAGGAGGTTGCTGCTGCACCGGCGCCGCGGGCCGCGCGAACGGCGGCGGCGGCTGCGACGGGGGAGGCGGGCTCCCGGGGAACGGTCTCGCACCGGGGGGCGGTGCCTGCGGCGCGCGGATCGACGAGGGCACGGGGCCATTCCCCCCGGGCGGCGCGAAGGGCGGGGGCGCGCGGGAGACGTGGAGGTTTGAGAAGGACGCCGGGAGGGAGGAAGCGGCCGGGTTGGGGGCAGGGGTAGGGTTTTGCGGCGCGAAGGGCGGCGGCGGCCGCGACGGCGACGCCATGGACGGGATCGAGGAGGGAGATCGGGATCTGAGGGGAGCGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0127100.1 | 12 | 13824487 | G | A |
| Osa12LNT0127100.1 | 12 | 13823038 | G | C |
| Osa12LNT0127100.1 | 12 | 13816938 | G | C |
| Osa12LNT0127100.1 | 12 | 13817446 | T | A |
| Osa12LNT0127100.1 | 12 | 13816561 | A | G |
| Osa12LNT0127100.1 | 12 | 13817949 | C | T |
| Osa12LNT0127100.1 | 12 | 13818638 | G | A |
| Osa12LNT0127100.1 | 12 | 13819469 | A | G |
| Osa12LNT0127100.1 | 12 | 13820303 | A | G |
| Osa12LNT0127100.1 | 12 | 13820336 | A | G |
| Osa12LNT0127100.1 | 12 | 13820770 | A | T |
| Osa12LNT0127100.1 | 12 | 13821016 | T | A |
| Osa12LNT0127100.1 | 12 | 13821513 | A | G |
| Osa12LNT0127100.1 | 12 | 13821720 | A | G |
| Osa12LNT0127100.1 | 12 | 13821736 | G | C |
| Osa12LNT0127100.1 | 12 | 13822441 | T | A |
| Osa12LNT0127100.1 | 12 | 13822861 | A | G |
| Osa12LNT0127100.1 | 12 | 13823550 | G | C |
| Osa12LNT0127100.1 | 12 | 13823673 | T | A |
| Osa12LNT0127100.1 | 12 | 13824277 | T | C |
| Osa12LNT0127100.1 | 12 | 13824441 | A | C |
| Osa12LNT0127100.1 | 12 | 13825376 | C | G |
| Osa12LNT0127100.1 | 12 | 13825692 | G | A |
| Osa12LNT0127100.1 | 12 | 13826320 | C | T |
| Osa12LNT0127100.1 | 12 | 13827066 | T | C |
| Osa12LNT0127100.1 | 12 | 13827097 | C | T |
| Osa12LNT0127100.1 | 12 | 13827165 | T | C |
| Osa12LNT0127100.1 | 12 | 13827195 | C | T |
| Osa12LNT0127100.1 | 12 | 13827470 | C | T |
| Osa12LNT0127100.1 | 12 | 13827564 | T | C |
| Osa12LNT0127100.1 | 12 | 13827655 | G | A |
| Osa12LNT0127100.1 | 12 | 13828589 | G | C |
| Osa12LNT0127100.1 | 12 | 13817586 | A | C |
| Osa12LNT0127100.1 | 12 | 13818670 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0127100.1 | osa-miR5143b | Translation | 5.0 | 20.827 | 1 | 24 |
| Osa12LNT0127100.1 | osa-miR5821 | Translation | 5.0 | 17.942 | 1 | 21 |
| Osa12LNT0127100.1 | osa-miR395f | Translation | 3.0 | 17.375 | 1 | 21 |
| Osa12LNT0127100.1 | osa-miR1435 | Cleavage | 5.0 | 18.785 | 1 | 20 |
| Osa12LNT0127100.1 | osa-miR1849 | Translation | 5.0 | 20.679 | 1 | 21 |
| Osa12LNT0127100.1 | osa-miR1861e | Translation | 5.0 | 18.31 | 1 | 22 |
| Osa12LNT0127100.1 | osa-miR1861k | Translation | 5.0 | 18.31 | 1 | 22 |
| Osa12LNT0127100.1 | osa-miR1861m | Translation | 5.0 | 18.31 | 1 | 22 |
| Osa12LNT0127100.1 | osa-miR1874-5p | Cleavage | 5.0 | 18.992 | 1 | 24 |
| Osa12LNT0127100.1 | osa-miR2091-3p | Cleavage | 4.5 | 13.689 | 1 | 22 |
| Osa12LNT0127100.1 | osa-miR5143a | Translation | 5.0 | 20.827 | 1 | 24 |
| Osa12LNT0127100.1 | osa-miR5337a | Cleavage | 3.5 | 17.01 | 1 | 21 |
| Osa12LNT0127100.1 | osa-miR5503 | Cleavage | 3.5 | 22.706 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0127100.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0127100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0127100.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0127100.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0127100.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0127100.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0127100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0127100.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0127100.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)