© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0009900.1
AGGCATATATAAACTAGTGCAACAGGTTCTATTAAAAATTTAAAATGCAGCAGGTTCAAAGCCTAGGCTGGCAGAATTGGACCACGTTTCGATCATCCAATTGGTGTATCACCAGAAACAGCTACTAAACAAAATGGCTAGCACTGAACTCAACCCGAATTCTTGCATAATTAATCCGAACGATCTTGCCTCCAAACAAAAAACCTACACAGTATGTGTAACGAGTGCTATGATCTATACACCATTTTCACTTTTGAGTTAGGCAGGTGAACTGCAATGGTCAAATGCTCTGACGATTCTAGCTGCTGGTACACTCAACGATCTCATCTGCGGCAGCCGGCGAGTCTCTTGTCAGTTTCAGGAAGTGTGTGCGGTTCGCGGCCAAGTCCTTCCTGAGCAGTTCAGAGTACTTCTCCAGTGACTTCTTGAAATCTGCAAACGATCTGTTGTTGTCGCGGGGATGCTTGGTGCCCTTCGCAGAGGATGATCCAACGACTGCGCCAGATATGTATGCGTCGCACGCATCCAGGATGACGCGCTCACGCTCATGGAAGTGGCGTGCAACAAGGGACTCAAAATGCTTTGGAGGCTTCCGAAGTGAATACATCATTGTCCTGCAGGATAGTAGGAAGGCAGTCTGATTATAAGCCAACGAGTACTTTTCTCCAGGAGCTGTATTAGCCGAATTTTTGTTGCCTGGCTCATTAAAGTATGGTTTATCATTCAACACAAGACCCTGGATGGAAACCAGCACCTGCAGTATGGTTGATTTTGACTTGCCCCACTTCTCGCATCCAGTACCCCACCAGGTGTTCAGCAGGCTAAGGCAAACTTTCCCACTCTCATACAAGTTTGGATTTAGCCGAAGCCCACCCGAATGGTAATGAACTTTCGGTGGAGATTGTGGGTATTCAGAAGGAAAGCGAACATCAAAGAAGAACAGACCATCATGATATGGAGTTCCAGCTGGCCCAACAATAGCAGCCCTCAGCAGATCAATCCTATCCTCATAAGCTCTAACATAGATAGATTCAGGTAGATCTTTCTGTAGAAGCTTCCATTCATTTTGGATTGTCTTCACCCAATCTTTGGAGGTCTTCCCTGGTGAATTCTTTGCATAGTAATGATCAGAAAAATCTTGCACAACATCAAATTGGTTAAACAAATTGTAGCCATCACTTTCAGATCCATATTCTGTCCTTGTCATTGATGATACAACACTTGAACATTCAGGCTCATGTTTTTGCACTAATAGCACAGTACCATTCCCACTTGAAAAGGGATCCAAAAGGCTGTTGTTTGTACTGACATTTGCAGTGGGGTGTGGAGCGGCAACTTTACAAAGAGGATTAATGGCTTTGCCTGCATGAAAAATATTCTTTTATTAGAAAACGCCAGGCAGAAGAGCAAAACACTTGATTTTATCTTTCTGAAACAAAATGAGTAGAACTCCGTGCTTCAGAGGGAGATGGGTATACAGGCTAATGAAATATTAAGTTTGTTTTTTCTTTATACAGTTTAACAAACTTCAAAACAGTGTTGACAACCAAGACTCATGGATTCATAACACCAGACTATCCACTAGTTCACTCTCCAGTGGATGTATCCAACCACACTAATAGCACTCTGAATTTGTCAAGATTAAGTTTATACTTTACACATCACATTTTGGTATACTTTGAAGCATCTGGTATAGCAATCCAGACCAATGTACAGCACCCACAATTATCCAACAATTTTAATCCATTATGACCACCTCATTTGATCTGCAGTATCCTTTCACCGGAAAACACATTAATATTTTCACTTTTTTTTAAAAAAAATGCAGAATTCATGGAAGAAAGAGTACACAAGACAACTAATAATATGCCATCAAAAGAGGAAAGCATCCTTGGATCAATCAAACAAACAGAAGCAGCTGATGTAAACATGATGTTAAATAGGGGCAGTAGTGCAGCTGTACAGCACCTTTCTTCTTGGAATCCTTCTTCTTCACACAAAACAGCTCGAGCACCTTGTTTAGAACCATCCTTAAAACCCGCTTCACGCGAAACGCACCTCGGGTTTGTCTGAGGTGGTGGTCGCGCTCTGCAGTTGAGAGGGGCCGGAGGAGGAGGGTTTTAGTTGCAGTCGGTGGAGACGAGACTGCAGGAGGCAGGAGGAGAAGCGGAGACGGACACAGGGACACTTGCTGCTGCTGCTGCTGCTGCGTTGCCTCTACCACTTCGGCGAGAGAGAGAGGCGCAATGGCCGCGAGGAGGGGGTGGACCGCACCCTTGCGTGCCCCGCGAGGAAAAGAACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0009900.1 | 1 | 7405723 | A | C |
| Osa01LNT0009900.1 | 1 | 7406442 | A | G |
| Osa01LNT0009900.1 | 1 | 7408436 | A | T |
| Osa01LNT0009900.1 | 1 | 7408437 | T | A |
| Osa01LNT0009900.1 | 1 | 7409445 | G | A |
| Osa01LNT0009900.1 | 1 | 7409599 | A | G |
| Osa01LNT0009900.1 | 1 | 7407084 | T | C |
| Osa01LNT0009900.1 | 1 | 7406436 | G | C |
| Osa01LNT0009900.1 | 1 | 7407108 | A | T |
| Osa01LNT0009900.1 | 1 | 7407734 | T | G |
| Osa01LNT0009900.1 | 1 | 7409126 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0009900.1 | osa-miR5526 | Cleavage | 4.0 | 17.805 | 1 | 21 |
| Osa01LNT0009900.1 | osa-miR812t | Translation | 5.0 | 10.844 | 1 | 24 |
| Osa01LNT0009900.1 | osa-miR812u | Translation | 5.0 | 10.844 | 1 | 24 |
| Osa01LNT0009900.1 | osa-miR1429-3p | Cleavage | 2.5 | 7.171 | 1 | 21 |
| Osa01LNT0009900.1 | osa-miR2093-5p | Cleavage | 4.0 | 17.351 | 1 | 20 |
| Osa01LNT0009900.1 | osa-miR2873a | Cleavage | 4.0 | 6.739 | 1 | 24 |
| Osa01LNT0009900.1 | osa-miR1863c | Cleavage | 4.0 | 14.135 | 1 | 24 |
| Osa01LNT0009900.1 | osa-miR1863b.2 | Cleavage | 5.0 | 14.17 | 1 | 23 |
| Osa01LNT0009900.1 | osa-miR812n-3p | Translation | 5.0 | 10.844 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0009900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0009900.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009900.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0009900.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0009900.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0009900.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0009900.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0009900.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0009900.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0009900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)