© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0129400.1
ACAAAGCATTTTGAATTTCAGGCATTAAGCACTAACATCAGTTGCACAAGCCCAAAGCCCCAAAACCATCATCGAAGTTTCACACAAATTGTACTGCTCACAGGCCCCATGGTTTTCAACTAAACTGCGACTGAAAATTGCGAGTTATTCACTCGAAACAAGCCGCGCCTCAGTAATCACTAAAACTGAAACTGATAAACCACATGGCACATGAAAGCACTAGCTTCAATGGGCAAATGCTCCTGCAATTTCCACTAAACTACTAATGAACAGAACCCTGTATCATCGATGTGAGTGATGGATGGACTCGAGCAGTTTTCATTGACCGAGAAGCACTTCTTCCTTCTGAATATTCCTCACCAAGAGGCCACCTTGGACGCAGGTCATACTGTGTTAAGACAATTATCAGGCATGATAATAGCCAGTCAGTCTTATAAAACATAGAACTTACACTGTATTAACGTCAGGAGTAGAGTAAAATTACCAAGTACAAGATTCCTTCCATAACATAAATACACAACAGGTCGATCTGAAGTGTGTTCTATTTTAATGTAAGAAAATTAGACGGCCTGATTCTGAGTTCTGACAATGTGCGAATTCCATCTTCCATGATATTAATTATAGGAAAACATTTGGATAAAAAATAACTCATAAACTGATCTTCGTGGTGGATCTGCCACCATCACATGGCTACTGATATCATAAATATTGACTAGCTTTGCTCACAGGCCAAGCTTATTTGATCAATCCCCCCAGAGTGTCAAACTGAAGGAGACATGAGGAATATAAAGGCAGCTATAGGAATGGGGAAGATGGTGAAAATGTGGATTGTTTGACTGGCTTGGATGCAATTTTGACATAACACAAGCTCACCTGTTCGATGACCATATGGCTCTAAGCTTATAATATGGTAGGCCGCAAGATGAAAATACCACCAAAACCAAATTTGGCAGGTAATTTGCTAGTTTTGAGATTTGAGTATTGAGGTTTGGGAGTCGTGGGTGAAAAAAAAGACTCTGGATGACTTGATGTAAACGAAATTATCGAACTTCAACTATAGTGCCAAATGCAGTTACTTGGGATTAAAAGGACATATATGCCAAATTTACCCAAATTAAGGTCAAGAACACGATATAATCTATCCAAGTCTCACATTTCAATGTTCGTTGAAATGCCATCGGTTTAGCTTTACACTCTTCCTCCTTATCAGTAGCAACACCAACTGCCTTTTAACAAGACCTTTTTTTATTGTAGCAGCAAAGAGTTGATCATGTATCAATGCATTTTTAAACTACCAAGTTATAAGAAGCAAAAAAAGCTTTCTGTGCTTGATGGTGCACTTTGTTTTGTTCAACTCATCAACTGAGCATATTAATTTGTCATGTTACCTGCATATCATCAGGCTCATCAACAGCAGGAGGATCATCAAATCTGCCTGCAATGAAATGCTCAATACCAGTCCAAGCAATCATGACACCATTGTCAGTGCAAAGCTTTGGGGGAGGGCATACGAGCTGTAGGCCATTCTTCTCAGCGATCTGATTCAAATGAGTTCTGACATACTGGTTTGATGCAACACCTCAAAGTATTTAATAGAAGGCTCCATCTTCAATGCCCATTCAACTGCTCGCTGGCATCTTTCTTCCAAATGTAAAACAGCAACTCGCTGAAAAGAGGCAGCAATGTTCGCCCTTATTTGTCTGTCATCTTTTGTCGCGGATGAAATAGGAATATCATCTGTTGATATGTTTCTGGATTCAATAGCCAATCGAACTTGAGTCTTCAGACCAGCATAAGAGAAATTGCAATCTTTGTGTTGTCGCATTGGAACACTAAACTTAACAGCATTTGGATCACCTTCTAGGGCAAGCTGTTCAAGAGCAGGACCGCCACCTTTCCGCATATCAAGACCTAACCATCTCGCTGACTTGTCATAAGCCTCACCAATTGCATCATCTATTGTAGTTCCCAGTTGAACATATTGACCAAGTCCATGAGCAAGAACAAGAAGATTGTGTCCTCCTGAAATTAGGAGGGCCAAAAATGGGAAATCAAGATCCTTGTTCACTAACCTGGAAACTAATGCATGTGCCTCCATATGATGAACTCCAACAATAGGCAGGCGAAATGATTTCGCTATTTTTCGAGCTTTGTGAACACCAACTCTGAGGCATAAACTAAGTCCTGGTCCTACGGTGACAGCCACTGCTGAAAGATCATTTTCTGACACATTTGCATCATCAAGTGCTTTCTGAACAACCTGATCAATCGCAAGAGAATGAGCTTCCTCGGCCATCTTCGGAGCGACGCCTCCCCACCTCACGAGTAAATTTGGGAAGATACCACCTGGCTTAGGATCTCGCCATCGCCTCTAACCACGGCGGCGGCGGTGTCGTCGCAGCTGGTCTCGATGCCGAGCATGAGGAGGTCTGCGGCGGCGGCGGCGGAGGGCATTGTGGCGAGGGAGCGGAAGGTAGGAGAGGACCGTAGCGGAGGGGAGGGGGCGGGGGCGAGGAGGAGTCGGAGGAGGGGAGCGGGAAGGGGTGAGGGGAACGGTGGGGCTCGCCGGAGGAGGAGGGCGGCGGCGGCGCGGGAGGCCGGCGGCGATAAGGTGGGGAGAAGAGTGGCCGCCATTCCACTCTAGCTCGGGTTACACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0129400.1 | 12 | 17926033 | A | G |
| Osa12LNT0129400.1 | 12 | 17924644 | G | A |
| Osa12LNT0129400.1 | 12 | 17924678 | G | C |
| Osa12LNT0129400.1 | 12 | 17924693 | C | T |
| Osa12LNT0129400.1 | 12 | 17924712 | G | C |
| Osa12LNT0129400.1 | 12 | 17924775 | T | C |
| Osa12LNT0129400.1 | 12 | 17924866 | T | C |
| Osa12LNT0129400.1 | 12 | 17924991 | G | A |
| Osa12LNT0129400.1 | 12 | 17925362 | C | T |
| Osa12LNT0129400.1 | 12 | 17925672 | C | T |
| Osa12LNT0129400.1 | 12 | 17925934 | C | A |
| Osa12LNT0129400.1 | 12 | 17925968 | G | T |
| Osa12LNT0129400.1 | 12 | 17926354 | C | T |
| Osa12LNT0129400.1 | 12 | 17926808 | A | G |
| Osa12LNT0129400.1 | 12 | 17926868 | A | G |
| Osa12LNT0129400.1 | 12 | 17927017 | T | C |
| Osa12LNT0129400.1 | 12 | 17927019 | A | T |
| Osa12LNT0129400.1 | 12 | 17927643 | C | A |
| Osa12LNT0129400.1 | 12 | 17927930 | A | G |
| Osa12LNT0129400.1 | 12 | 17928334 | A | G |
| Osa12LNT0129400.1 | 12 | 17928376 | A | G |
| Osa12LNT0129400.1 | 12 | 17928382 | C | T |
| Osa12LNT0129400.1 | 12 | 17928480 | C | T |
| Osa12LNT0129400.1 | 12 | 17928580 | T | A |
| Osa12LNT0129400.1 | 12 | 17928755 | C | G |
| Osa12LNT0129400.1 | 12 | 17928794 | T | C |
| Osa12LNT0129400.1 | 12 | 17928866 | C | T |
| Osa12LNT0129400.1 | 12 | 17928934 | C | T |
| Osa12LNT0129400.1 | 12 | 17928982 | A | C |
| Osa12LNT0129400.1 | 12 | 17929095 | T | C |
| Osa12LNT0129400.1 | 12 | 17929367 | G | T |
| Osa12LNT0129400.1 | 12 | 17929401 | T | C |
| Osa12LNT0129400.1 | 12 | 17929682 | A | C |
| Osa12LNT0129400.1 | 12 | 17929732 | C | T |
| Osa12LNT0129400.1 | 12 | 17929754 | C | T |
| Osa12LNT0129400.1 | 12 | 17929894 | C | T |
| Osa12LNT0129400.1 | 12 | 17929987 | A | G |
| Osa12LNT0129400.1 | 12 | 17930009 | T | G |
| Osa12LNT0129400.1 | 12 | 17930491 | C | G |
| Osa12LNT0129400.1 | 12 | 17930552 | G | A |
| Osa12LNT0129400.1 | 12 | 17930782 | T | C |
| Osa12LNT0129400.1 | 12 | 17931045 | A | C |
| Osa12LNT0129400.1 | 12 | 17931127 | G | A |
| Osa12LNT0129400.1 | 12 | 17931500 | A | C |
| Osa12LNT0129400.1 | 12 | 17931525 | A | G |
| Osa12LNT0129400.1 | 12 | 17931646 | C | T |
| Osa12LNT0129400.1 | 12 | 17925702 | C | T |
| Osa12LNT0129400.1 | 12 | 17927350 | C | T |
| Osa12LNT0129400.1 | 12 | 17931238 | A | G |
| Osa12LNT0129400.1 | 12 | 17931616 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0129400.1 | osa-miR5530 | Translation | 5.0 | 14.685 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR812p | Translation | 5.0 | 18.859 | 1 | 24 |
| Osa12LNT0129400.1 | osa-miR2873c | Cleavage | 3.5 | 14.868 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR156l-5p | Cleavage | 5.0 | 18.632 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR1851 | Translation | 4.0 | 18.442 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR2092-5p | Translation | 3.0 | 9.485 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR2096-5p | Cleavage | 5.0 | 23.408 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR812o-3p | Cleavage | 4.0 | 13.547 | 1 | 24 |
| Osa12LNT0129400.1 | osa-miR5144-5p | Translation | 5.0 | 15.602 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR5144-5p | Cleavage | 4.5 | 20.202 | 1 | 21 |
| Osa12LNT0129400.1 | osa-miR397a | Translation | 5.0 | 20.753 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0129400.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0129400.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0129400.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0129400.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0129400.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)