© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0010000.1
CATCAAGGTTGTTCATGTTCTACATCAAGATAATCTCAAGTTGTTGCATGTAAAAAATATCATATTTAGCATAGCATTTGAGCTCAAGACAAATAGGCCCTTCATACTTAACGTTGTTCTATCTCAAGTTGTTGCACTGCATGCCAAAATCTCTGACTACAGAAGCTGATAATCTGGCAATGAGAATGACCTTTCTCCAGCAGCATAACCGGACGTATTCGATTGCAGCTAAAACGTCTGAGTCACAAGACATTCCATGCAGCTTTGGATGGTATGTGCCTTGTCCATCCATCAGCCTGAAACATCAATTCTTACATGGTGAGTTTGCAAAGAACATATACCATTTCGGAGGTCGAAAAGCCGACTCTACACAACAATTAGCCAGAAATCGGTGCTGCAAGAACTCAAGGACTTCTTCATCCATCAGGATAGGCTGGGTCGATGACGAGGGTTTATACTACAATGGGTTTAGTTTGGATGATCTTTGTTGGGAGGAATAGGCAAAAAACAAAAAAACAAAAAACAAAAAGCACGGAAGAAGAGCTACACTACTACTCGCTTGAATGGGCAGATGCGGGATAAGCCATCAAAGCATCTGTTGAGCCAGAATCGATTCGGGGTGCACGGAGAACTCAAGTTCCAGCACCGTAACAGGAGGCCTGACTGTTACTCTCAGTCACCATATCTTGTTCTTGACCCAAAAGAGCATCAGTACTATTCCAATCACAATGGCAACAAGGGCATACTTGCGAATAAGGGCCTGACGATTGAGATCCTTCGCCTTCTCCGCATAAATTCTAGTATCAGAGATCAACCTATTGGACATTTCACTCACCTCTGCAAACAGAAAACTTTCACTGAGCAACAGCTGGGAAATGTAAACCTCTAAGCATGAAACGAAATGTGAGATGAGACTGCAACAAGTCTTGCCAAAAGTGAAGCACTCATGCAAAACTGTCAAAGCGTGGGATTACAGGCAACACAAAGAAAGAAACAGCTTTGGTGTGTACTGGAGCAAACAATTCAAAAGGAAGCATGAGTCTAAGAAATATTAATAAGATGTGAAACAACAAAATGGCCTATTGAAGGAAAACACAAAATATAACAACAATATAGTGCGGAATGAAAACACAACTCAAGTAATTTTAGGGCAAGATAGTCTGCTGAAACCAAATTGATTTTGCGAATTTGACTGCTCACCTATTCACTGATAATCTTTCAAGGAAATACGTAAACTCAAGTTAATCTCATATGCACAGAAATCATTGACAAGTCCATCGTGCTAAAAACTATGATGAACGATGCAGCATAACACAGATAAGGTGCAAAGGCAAACTCATGATCTAGTTTTTCACCAACACCGAGAACTTCTTGAAAATTGCGAGTCATAATCTGGTGCACCTCATAAAGCTCATCATTCAACTTGGCCAGGTTCCTTTGGGTTCTGGTATCCAAATACAACTTCTTCGTCTTCTGTATGAAAGTGTCAAACTTAATAAAAGCATATGGTCTTGCAGCAGTTTCAATTTGGTTGCCATTGACCCTCTCAAATTCATTTTTGAGATCTTCTAAGTACTGGAAAGCAAGTTTCTTCGGATAAGAGCAGTCACACATTGTCAAATAGCACACACGGCCCTCGATGATGTAATGGAAAAGGTATGGCCCAGTCTCAATTGACATCCTTGATGCTTCATGTTGCCCTTTCGATAAGTTCTTGAACAACAGTTTAGCTTGCTGCTTGTAGAAGTCAGCATCCTTCAGATCCCGACCATCATCTAATCCCTCCACTAACGGAAGGTCATCAGTAACACGTGCTATCATTGTCAGCTTCACCATTTTGGATATGCAGCGTGAAATGAACTAGCATAGGCAATCTGAAAGTGCCACCTTCAAAATTTCGAATCGGGCCGCGAGGTGGGGGCGCCGGTGGGATGAGCCGGCCGCGTCGCCGCCCCCGGCGAACCCGCTCGCCGGCGATCGGGGGAGGAGAGGAGCACGTCCGCCGCCGTTGCCTCCGGCGGGAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0010000.1 | 1 | 7442832 | T | C |
| Osa01LNT0010000.1 | 1 | 7439379 | T | C |
| Osa01LNT0010000.1 | 1 | 7439634 | G | A |
| Osa01LNT0010000.1 | 1 | 7440091 | C | T |
| Osa01LNT0010000.1 | 1 | 7441391 | C | G |
| Osa01LNT0010000.1 | 1 | 7443091 | A | C |
| Osa01LNT0010000.1 | 1 | 7440349 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0010000.1 | osa-miR5543 | Translation | 5.0 | 13.227 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR5793 | Cleavage | 4.5 | 18.559 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR166b-5p | Translation | 3.5 | 19.18 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR167h-3p | Translation | 3.5 | 8.404 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR166g-5p | Cleavage | 4.5 | 16.39 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR166j-5p | Translation | 4.5 | 10.975 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR820a | Cleavage | 4.5 | 16.637 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR820b | Cleavage | 4.5 | 16.637 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR820c | Cleavage | 4.5 | 16.637 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR1424 | Cleavage | 4.5 | 16.547 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR1853-3p | Translation | 4.0 | 17.199 | 1 | 22 |
| Osa01LNT0010000.1 | osa-miR1863a | Translation | 5.0 | 17.155 | 1 | 24 |
| Osa01LNT0010000.1 | osa-miR2090 | Translation | 2.5 | 10.084 | 1 | 22 |
| Osa01LNT0010000.1 | osa-miR2864.2 | Cleavage | 4.5 | 10.333 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR2864.2 | Cleavage | 5.0 | 5.923 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR2864.2 | Translation | 5.0 | 15.208 | 1 | 21 |
| Osa01LNT0010000.1 | osa-miR1863b | Translation | 4.5 | 17.155 | 1 | 24 |
| Osa01LNT0010000.1 | osa-miR5159 | Translation | 5.0 | 18.431 | 1 | 24 |
| Osa01LNT0010000.1 | osa-miR5511 | Cleavage | 4.5 | 14.612 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0010000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0010000.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0010000.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0010000.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0010000.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0010000.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0010000.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0010000.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0010000.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0010000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)