© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0131400.1
GCACAATCAAGTTAATAATATGTATTTCCTAATTAACGATGTTTACTCATCAGATTTGAGAAAAATAGTCACCCAATCAACCTCATGCATTTCGCAGTTGGAGAAAAATAGTCACCCAAGTTACATTTTGATGTCTGTTGGAACAGCAGAACATGCTTTACCTCTTCTGAAAATTAAATTTCTCAATTGAAAAAGAGAACAGGATTATCAACACAAAAGGAAAGGCAATGAGAACAGCTGCTACTAGGCTCAACTTGTCTTTATGAAACCCGAAATAGTCATTCAAGAAGATCGAAACTGATTTAGTTTCTCCAAATGCTCTGACCTCTTTCTCTATGTTCCCATACTGTGATGTCAAGAGGGCATCGAGTGTCCAAGATGTAGGAGTGAGATAGTAGAGCCAAACCCACCACTTTGGGATTTGAGGCGCAGGTAAAATAAATCCTGAGAATAGTGTTTGCATGGTGTTGAAAAAAGATGCCAATATGGTAGCAACTTGAACATTGGGGGTTAATGAAACAAGAAGCAACCCAACATAAATATAGGAGAGACTTGAACAAAATGTAGTGTAGAAGAACCATATGAATTTGTGTGTTGTCCAATAATAACCAATTGATGGATAGATAATTAACGTGTATAGTACCACTTGGATAAATACATAGGGGATCTCAATGGCAGCCTGTGCGAATGAATATGACCAAGATGAGTACATTCCTGCAAACTTCTCACGATACATTACAATGCGCTCGGTTGTACTGAATGGTATGATTGACTGATGATTATAAGACCCTATAGTTGTGGAACCCAGATACATTGCACCAAAAACATTGAACAGGTCTTGCTCGTCGTTTAATATTTTTGCACGCTTCCAGAACAATACTCCGTAGACCAGGGCAGATATTACTGTCAGCATTATACGCCTCAAGTTATACTCAGGACTTCTCCAGTAAGTTAAGTTTTGTTTCCACAAGCAAGCTTTTAGTTGAATCCAGCCATTCCGTGGGAAACGATGGGAGAAAGATAGAATTTCTGAATTTGGTATTGGGATGCTTAGCTTCTCCACTAGCTCTACGATGTCTCTATGCTGTGATGATTCGTCATACAAAATCGCAAAGTCCATGTTGTGTTGCACCTCCATTGATGTTGATGTTACGTCCATCATCCAAGCAGCTGGATTGCAGTTACTCTTTACTTTCAAGACCCCAGAAATTTTCTCAAAGTACTCAATCACTTTGCTGGAACGCTCTCCTATTGGTCCGTTATAGATTATTTTCCCACCATTTTTCATTAGTATGAGCTCATCAAACGCCTCAAAAATTTTAGTGCTCGGCTGATGGATTGTACACACTACTGTCCTTCCTGTTTTGCAAATATTTTTAACAGCACGAATAACAATTGCTGCTGACCTTGTATCTAATCCTGTTGTTGGTTCATCCATTAGTATGACTGATGGGTTTGAAACAAGCTCGACTGCAATTGTTAGCCTCTTTCGCTGCTCCATGGATAATCCATTTTTCTGTGGTGTCCCCACTAAGACATCTTTTATTTGATCTAGTTCAACAGTTTCAAGGACTTCAGCAACAAATTCAGATCTTGTTTTTTTGTCGACATGAGAAGGTAGACGAAGCCAAGCAGAATAAGTTACAGACTCTTCAACTGTGAGCTGTGGGGAATGTATGTCGGCTTGCTCACAGTAACCTAAGATTCTAACAAATGTTTCTTGCACCTTGGGATATCCACCTATTCTTATGTCCCCTTCAATATATCCTCCTGTTTTCCTTCCTGCTAATACATCTAGCAGAGTTGTCTTCCCGGCTCCACTGACACCCATTAGTGCAGAAAGAACACCGGGACGCAATGCACCAGTTATGTTGTTAAGTAGTTGAAGTCTTTTTGTTGGATAGCCTTGTTTCAGCATTTCCGGTGGGGTATCAATGTAGTAGTTCAGATTGTGGAACGTAATTGGAAGTTCCATAACAGGTATAGTCATCTTTGCTCTGGAAATATTTGAATGACCATCAGATTCTTTTCGTATATTAGAATCTTTTTCCTGTTCTTGACATAACCTCTTTATAGGCCTACTTCCATGATATTCTTCTATAGATGTAATATAATCTAGCGCCAATCCAAAAGCGATATAAAATAAAATGATTGATCCGAACAATGCTCCAATGGATATCCAATAAAAGTGCCAACTGTAATATAGGCCATGATTAATCAGGATTCGGTTCCCAATTGTTATGTTTTGAATAGTTTCCTTCTGCCATCTTGGCGCTTGGAATTCATTAATAACTGTGCCGATTTCTGCATATGTCATTGGAGAAATCCAAAATCCCCAGTTTAACCATCCTGGCATGGAGGGCTTGGGAAGAGTGAAGCCTCCAAACATGAGGAAGAATGTTAGAGCCAGAAAAAGGTAGAAGAAAGACGCAGTAGGTGTTTGGAAGTATGAAGCAATAAATCGATACAGCGAAGTGACTGATTGATGGACAAAACAAAGCATCAGAAATTGGCAGAAGAACCTCGAAACACTAGCTGTATAACCAATACCGTAATATGTGATACATATCCATACAAGTGAATCTAATATGGAAACAGGGACCTTTAGGACTGAAGCTGGTATTGCATATGCCCATGAAGAATAGAAATAATAGCTCTTTTGCTTGTAAAAACTTGGGAGTCTCCTAATCTGCATGCTTATCTCTGGTGTGCCATTTAGCATGATCATTAAGATGGAAAAAAACAATGCTCCCATATAGTAAGTTGCGTGAGTGAAATCTGTTGTCATGCGAGTTCGAAGGAACACAGACATTGTTACGAGTGCAATAATGGCAAGCTGGCCTGTTTTGAAGACATAAACAAACATACTCCTTTTCATTAGGAGTGCTTCCCTTGCTCCACAGGCTTTGAACATTTCCAGTTTTTGCAGAGAATATTTATTGAATGCTAAAGCTTCCTTGCCCAACTCGCTTTTCGGAGAAACAATTGGTTCTTCTAGTTTTCTCCCTCTGTGATTTTCCTTGAACATGCTTGATAATTCATGGGGTGATATATATCTGTAAGATTCATTTGGACCAGACCAGTACTGTTGTTGGTCCTTGCAGGACAAGATCTCTTGGAGAAAGTCAGCTACCTCTTTTCTTTCTGGGCATATGAACCCACACTCCTCAAAAAAATTCAGAGCTTCATTTCGAGGGCCATGGTATATAATTTTCCCTTCTGCCATTAATATCAGGTCATCAAAAAGATCAAATACCTCAGGTGTTGGTTGAAGAAGTGAAATAACCATGGTGTACTCGCTGATGTTCGTCAGTTGCTGGAAACAACTTATTATTTGAAAAGTGGTAGAGCTATCCAGACCATTTGATATTTCATCCATAAAGTATGCTCTTGCAGGCCCCACAATCATCTCAGCTGTGGTTAATCTTTTCTTCTGCCCCCCTGATAGTCCTCTTATCATTGCATCCCCAACCATCGTGTCTGCGCATATCTCTAGCCCCATGATCTTCAAAATATAGTCTGTCTGTAGGCTTCTCTTTGAAGCTTCAACTGATATAGCCTTCATGTATATATCTATGTCCGCATCAGGTATGATCCCCGCCGCGCTCTCCCTCGCGCTCACCTCCTTGAGTATTTTTGGTCTTCTTCCAACACCTTGGCACCGGGATGAGAAGTCCAAAGTCTCCCTCACAGTCATCTCAGGAATGTGTAAATCGTATTGGCTGATATACGCGGCTGTTTTCTCAGGCACAAATTCATCAAGCTGATAGCCATTGTAAGAGATATCCCCTGTTACCTGTAAAAGCTTTGCATCTTCACATTCAGTTTGTCAGAACATAAAACTTTCTTGTTCTTGATTTTTAGTTTGTGGTCGAGCTCGGGCGTTGGCCGAGGGCGAGACGACGTGGGCGGCGGCGACGATGAGGATGAGGAGGAGGAGGAGGCCACCCCCTCGCGCCGGAAGCTCGGGGTTCCTCCGCCCCGAGCCGCCGATCCTCGTCAGGCAGCGCCGCGGCGGGCGGCCAAGAAGAGAGAAGAGTCAGGGGGGGCCATGGCCGAATGTCTGGGGATTTGGGTGAAGGGAGAAGAGACGGAGACGGGCAGCGTAGAAGGCTGCCGGAGGCGGAGAGGGAGGTGGCAAGCCACCGCCCACCGGCGGCGGCGGCGGCGGCGAGCGAATTGCGGCGGCGCTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0131400.1 | 12 | 19832153 | T | C |
| Osa12LNT0131400.1 | 12 | 19829278 | A | G |
| Osa12LNT0131400.1 | 12 | 19829588 | T | C |
| Osa12LNT0131400.1 | 12 | 19830262 | T | C |
| Osa12LNT0131400.1 | 12 | 19831106 | A | C |
| Osa12LNT0131400.1 | 12 | 19831235 | G | A |
| Osa12LNT0131400.1 | 12 | 19831305 | A | C |
| Osa12LNT0131400.1 | 12 | 19831673 | G | A |
| Osa12LNT0131400.1 | 12 | 19831948 | T | A |
| Osa12LNT0131400.1 | 12 | 19832022 | A | G |
| Osa12LNT0131400.1 | 12 | 19833451 | G | C |
| Osa12LNT0131400.1 | 12 | 19833698 | C | A |
| Osa12LNT0131400.1 | 12 | 19833761 | C | T |
| Osa12LNT0131400.1 | 12 | 19833967 | G | A |
| Osa12LNT0131400.1 | 12 | 19834020 | T | C |
| Osa12LNT0131400.1 | 12 | 19834327 | C | T |
| Osa12LNT0131400.1 | 12 | 19835415 | A | T |
| Osa12LNT0131400.1 | 12 | 19835451 | T | A |
| Osa12LNT0131400.1 | 12 | 19835570 | T | C |
| Osa12LNT0131400.1 | 12 | 19835960 | A | T |
| Osa12LNT0131400.1 | 12 | 19836199 | G | A |
| Osa12LNT0131400.1 | 12 | 19836916 | A | G |
| Osa12LNT0131400.1 | 12 | 19830353 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0131400.1 | osa-miR5801 | Translation | 4.0 | 12.946 | 1 | 24 |
| Osa12LNT0131400.1 | osa-miR5808 | Translation | 4.0 | 12.946 | 1 | 24 |
| Osa12LNT0131400.1 | osa-miR5834 | Cleavage | 4.0 | 19.04 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR5079b | Translation | 4.0 | 9.853 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5079b | Cleavage | 5.0 | 21.65 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5079b | Translation | 4.5 | 17.942 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5539b | Translation | 5.0 | 17.241 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR816 | Cleavage | 5.0 | 11.241 | 1 | 20 |
| Osa12LNT0131400.1 | osa-miR1438 | Cleavage | 5.0 | 12.428 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR1847.1 | Cleavage | 5.0 | 18.709 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR1853-3p | Cleavage | 4.0 | 18.227 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR1428e-5p | Translation | 4.5 | 21.015 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR1859 | Translation | 5.0 | 21.082 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR1874-3p | Cleavage | 4.0 | 13.902 | 1 | 24 |
| Osa12LNT0131400.1 | osa-miR1428f-5p | Translation | 4.5 | 21.015 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR1428g-5p | Translation | 4.5 | 21.015 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR2100-5p | Cleavage | 5.0 | 17.756 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR2118e | Cleavage | 3.5 | 21.304 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR2118p | Cleavage | 4.0 | 21.304 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR2118r | Cleavage | 3.5 | 21.304 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR2865 | Cleavage | 5.0 | 15.657 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR2869 | Cleavage | 4.5 | 19.07 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR1863c | Cleavage | 5.0 | 13.869 | 1 | 24 |
| Osa12LNT0131400.1 | osa-miR2873b | Translation | 5.0 | 18.679 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR5079a | Translation | 4.0 | 9.853 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5079a | Cleavage | 5.0 | 21.65 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5079a | Translation | 4.5 | 17.942 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5081 | Cleavage | 5.0 | 10.708 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5489 | Cleavage | 4.0 | 13.108 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR5489 | Translation | 4.5 | 10.156 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR5503 | Cleavage | 4.5 | 18.005 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5514 | Translation | 4.5 | 17.762 | 1 | 21 |
| Osa12LNT0131400.1 | osa-miR5539a | Translation | 5.0 | 17.241 | 1 | 22 |
| Osa12LNT0131400.1 | osa-miR5815 | Cleavage | 5.0 | 22.832 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0131400.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0131400.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)