>Osa12LNT0132600.1

GTCTCATAGATTAAGGGAAAACTAAAGTTCGGATAATGTAATTTTATAATAATTTAAGGTTTCTATTTTTCTTAAAGTATCTTAAAAATCCATTCACAAATTTTTAAGTAGGAGATGGATTAAGTACTTACGACTTTTGAATCATGTTATTTTCTCGAGTAAATAATAAACTATATATTGCTTGTAGTATGGCTACAAATTAAAAATGTGAGAGCAAGATACTCAAAATTCTTGTGATTAAATCGTCTCATGAAGGCGCATGATATAGTAAGAAAGAGAGGGAAGCGTATACATGAAGAAAAGAAGAAAGGGAAAAATGATAAAAGGGAGGGGAAGCATAGGTACCCACGCGTACGTAGGTGCGTATCGAAGGTGGAGAGGTGGGACCTTGTAGTATTTAGTTTCTTCTAAGATCAATTTAATCTAATGGTTTATAATATTGAACCCACCGATTTAAGTGAAAATCAAGTAATAGATAATTTGCTGTTTTTCTTAGAATTTCTAATATGTTCTCTAATTTATTAGAGCACCAAGTGGTAGCTTGAGGGTATTTGAAATTTTAATGGACTTACCACATGTAATGAGAATATTAACATGTAATATATATGTATGGGATATATGTTAATATTCATTCTAGCTTTGTCCATGTTTATATACATGTAGAGAGAAATTAAATATGTTGCTAGCAAACCATTAGATGTCTAATTAATAGCAAATAATTTTGACACATATTTGCAATTGTTCATAGTAGCTCTTAAGATTCATGTTACCACTTTGATTATTCGTTGATCACCATGATTCGCACGAAAAAAATATGTACTACTTAGGGTTTAGGACAACTGAAATTTATGAATTATCTGATTTATGTGATAGCTATTTGAGATTATAAACAAATGAATTAACTTCTAAATAGTTAAAAAGTCGTTTAAGAAAAGCACCATTTATAAACTTGGAAAAGCGTGGAGC

Explanation	CPC Score
noncoding	-1.28595

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa12LNT0132600.1	osa-miR5542	Cleavage	4.0	10.794	1	21
Osa12LNT0132600.1	osa-miR5815	Translation	4.5	14.47	1	24
Osa12LNT0132600.1	osa-miR6251	Translation	4.0	14.576	1	21
Osa12LNT0132600.1	osa-miR528-3p	Translation	4.5	20.91	1	21
Osa12LNT0132600.1	osa-miR812f	Cleavage	5.0	14.66	1	24
Osa12LNT0132600.1	osa-miR3981-3p	Translation	4.0	19.511	1	21
Osa12LNT0132600.1	osa-miR5490	Cleavage	5.0	17.304	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa12LNT0132600.1	12	qDLA-12-3	Resistance or Tolerance	Blast resistance	RG463	RZ816
Osa12LNT0132600.1	12	nan	Morphological trait	Seed	RG543	RG81

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus